RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LRIG1Q96JA1 1093 aa3.87□□□□□ -1.79
SCFD1-213ENST00000554776 MRGPRX1Q96LB2 322 aa3.87□□□□□ -1.79
SCFD1-213ENST00000554776 STRBPQ96SI9 672 aaKnown RBP3.87□□□□□ -1.79
SCFD1-213ENST00000554776 IMPG2Q9BZV3 1241 aa3.87□□□□□ -1.79
SCFD1-213ENST00000554776 TINAGL1Q9GZM7 467 aaPredicted RBP3.87□□□□□ -1.79
SCFD1-213ENST00000554776 UNKLQ9H9P5 680 aaKnown RBP3.87□□□□□ -1.79
SCFD1-213ENST00000554776 ZMAT3Q9HA38 289 aaKnown RBP3.87□□□□□ -1.79
SCFD1-213ENST00000554776 ATP6V0A4Q9HBG4 840 aa3.87□□□□□ -1.79
SCFD1-213ENST00000554776 MRPS18AQ9NVS2 196 aaKnown RBP3.87□□□□□ -1.79
SCFD1-213ENST00000554776 CTTNBP2NLQ9P2B4 639 aa3.87□□□□□ -1.79
SCFD1-213ENST00000554776 TAGLN3Q9UI15 199 aa3.87□□□□□ -1.79
SCFD1-213ENST00000554776 MTO1Q9Y2Z2 717 aaKnown RBP3.87□□□□□ -1.79
SCFD1-213ENST00000554776 COMMD10Q9Y6G5 202 aa3.87□□□□□ -1.79
SCFD1-213ENST00000554776 EPN1Q9Y6I3 576 aaPredicted RBP3.87□□□□□ -1.79
SCFD1-213ENST00000554776 A0A1W2PS29 197 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 PLEKHD1A6NEE1 506 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 GOLIM4O00461 696 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 ERN1O75460 977 aaKnown RBP3.86□□□□□ -1.79
SCFD1-213ENST00000554776 CHEK2O96017 543 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 HRGP04196 525 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 KITP10721 976 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 PHKG2P15735 406 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 HDCP19113 662 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 FDXRP22570 491 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 PIK3CBP42338 1070 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 ZNF135P52742 658 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-213ENST00000554776 SEC24CP53992 1094 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 SOX8P57073 446 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 FAM193AP78312 1265 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 POU6F2P78424 691 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-213ENST00000554776 EXOSC9Q06265 439 aaKnown RBP3.86□□□□□ -1.79
SCFD1-213ENST00000554776 SEMA5AQ13591 1074 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 FGL2Q14314 439 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 HABP2Q14520 560 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-213ENST00000554776 GEN1Q17RS7 908 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 CRB2Q5IJ48 1285 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 GORABQ5T7V8 394 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 APOA5Q6Q788 366 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 MAEAQ7L5Y9 396 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 PPP1R32Q7Z5V6 425 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 SRLQ86TD4 932 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 SLC17A8Q8NDX2 589 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 SUPT20HQ8NEM7 779 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 LRTOMTQ8WZ04 291 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 ELAC2Q9BQ52 826 aaKnown RBP3.86□□□□□ -1.79
SCFD1-213ENST00000554776 ZNF700Q9H0M5 742 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 MYH16Q9H6N6 1097 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-213ENST00000554776 ETAA1Q9NY74 926 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 PCDHA6Q9UN73 950 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 AGAP1Q9UPQ3 857 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 CORO2BQ9UQ03 480 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 MAST3O60307 1309 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 USP19O94966 1318 aa3.86□□□□□ -1.79
SCFD1-213ENST00000554776 CCDC195A0A1B0GUA6 201 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 KPNA5O15131 536 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 SUV39H1O43463 412 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 DNAJB5O75953 348 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 SUN1O94901 812 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 NPR1P16066 1061 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 KCNA2P16389 499 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 TYRP1P17643 537 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 INHBEP58166 350 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 GPSM2P81274 684 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 MC2RQ01718 297 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 ZNF844Q08AG5 666 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 FOXI1Q12951 378 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 KHDC1LQ5JSQ8 128 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 SP5Q6BEB4 398 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-213ENST00000554776 TAPT1Q6NXT6 567 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 XRRA1Q6P2D8 792 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-213ENST00000554776 COLGALT2Q8IYK4 626 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 SPICE1Q8N0Z3 855 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 GPR150Q8NGU9 434 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 TNIP3Q96KP6 325 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 Q96MF0 132 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 C22orf23Q9BZE7 217 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 RSAD1Q9HA92 442 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 SARS2Q9NP81 518 aaKnown RBP3.85□□□□□ -1.79
SCFD1-213ENST00000554776 TBCCD1Q9NVR7 557 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 TESQ9UGI8 421 aaKnown RBP3.85□□□□□ -1.79
SCFD1-213ENST00000554776 MED16Q9Y2X0 877 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-213ENST00000554776 NEU2Q9Y3R4 380 aa3.85□□□□□ -1.79
SCFD1-213ENST00000554776 PRAMEF33A0A0G2JMD5 474 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 PHGDHO43175 533 aaKnown RBP3.84□□□□□ -1.79
SCFD1-213ENST00000554776 MGEA5O60502 916 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 PRAMEF10O60809 474 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 ESRRBO95718 433 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 LMNAP02545 664 aaKnown RBP3.84□□□□□ -1.79
SCFD1-213ENST00000554776 GNAI2P04899 355 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 PIM1P11309 404 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-213ENST00000554776 ADRA1BP35368 520 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 MPLP40238 635 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 PRIM2P49643 509 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 TOB1P50616 345 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-213ENST00000554776 ALDH5A1P51649 535 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-213ENST00000554776 ARFIP2P53365 341 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms