RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 KIF20AO95235 890 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 POU2F2P09086 479 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 TYRP14679 529 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 CHRM3P20309 590 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 AKAP5P24588 427 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 PHKA1P46020 1223 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 MAP2K6P52564 334 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 CCDC157Q569K6 752 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 FAM160B1Q5W0V3 765 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 SRRM1Q8IYB3 904 aaKnown RBP5.14□□□□□ -1.59
SCFD1-210ENST00000553693 BRIX1Q8TDN6 353 aaKnown RBP5.14□□□□□ -1.59
SCFD1-210ENST00000553693 FBXO41Q8TF61 875 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 HASPINQ8TF76 798 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 ATRIPQ8WXE1 791 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 FAM136AQ96C01 138 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 MTFMTQ96DP5 389 aaKnown RBP5.14□□□□□ -1.59
SCFD1-210ENST00000553693 SMOC2Q9H3U7 446 aa5.14□□□□□ -1.59
SCFD1-210ENST00000553693 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-210ENST00000553693 M0QYG6 137 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 VPS4BO75351 444 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 RHOP08100 348 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 ELFN1P0C7U0 828 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 NR2F6P10588 404 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 ZFXP17010 805 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-210ENST00000553693 GCLCP48506 637 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-210ENST00000553693 NEK2P51955 445 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 PROK1P58294 105 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 BMPR2Q13873 1038 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 FCRLBQ6BAA4 426 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 SUMO4Q6EEV6 95 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 CATIPQ7Z7H3 387 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 AMIGO2Q86SJ2 522 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 USP37Q86T82 979 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 MVB12AQ96EY5 273 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 NELL2Q99435 816 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 AMBRA1Q9C0C7 1298 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 TCF7L1Q9HCS4 588 aa5.13□□□□□ -1.59
SCFD1-210ENST00000553693 VWC2LB2RUY7 222 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 INO80B-WBP1J3KQ70 363 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 EBLN1P0CF75 366 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 DRD4P21917 467 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 ITPKBP27987 946 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 EXOSC10Q01780 885 aaKnown RBP5.12□□□□□ -1.59
SCFD1-210ENST00000553693 FOXF2Q12947 444 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 TBCCQ15814 346 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 ZNF618Q5T7W0 954 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 EMC10Q5UCC4 262 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 KIAA1614Q5VZ46 1190 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 SFRP4Q6FHJ7 346 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-210ENST00000553693 ZNF551Q7Z340 670 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-210ENST00000553693 PPP1R3BQ86XI6 285 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 RASAL3Q86YV0 1011 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 FAM109AQ8N4B1 249 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 SH2D3CQ8N5H7 860 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 CAMKK1Q8N5S9 505 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 RFKQ969G6 155 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 CDK5RAP3Q96JB5 506 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 MAP3K14Q99558 947 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 GTPBP4Q9BZE4 634 aaKnown RBP5.12□□□□□ -1.59
SCFD1-210ENST00000553693 INO80BQ9C086 356 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-210ENST00000553693 PNPOQ9NVS9 261 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 PADI4Q9UM07 663 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 ST3GAL5Q9UNP4 418 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 AGAP1Q9UPQ3 857 aa5.12□□□□□ -1.59
SCFD1-210ENST00000553693 NOP58Q9Y2X3 529 aaKnown RBP5.12□□□□□ -1.59
SCFD1-210ENST00000553693 H3BUI4 141 aa5.11□□□□□ -1.59
SCFD1-210ENST00000553693 AHSGP02765 367 aa5.11□□□□□ -1.59
SCFD1-210ENST00000553693 PIM1P11309 404 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-210ENST00000553693 CCT8P50990 548 aa5.11□□□□□ -1.59
SCFD1-210ENST00000553693 LOXL3P58215 753 aa5.11□□□□□ -1.59
SCFD1-210ENST00000553693 LAYNQ6UX15 382 aa5.11□□□□□ -1.59
SCFD1-210ENST00000553693 KLHDC4Q8TBB5 520 aa5.11□□□□□ -1.59
SCFD1-210ENST00000553693 SLC35A4Q96G79 324 aa5.11□□□□□ -1.59
SCFD1-210ENST00000553693 MOGAT1Q96PD6 335 aa5.11□□□□□ -1.59
SCFD1-210ENST00000553693 AASDHPPTQ9NRN7 309 aa5.11□□□□□ -1.59
SCFD1-210ENST00000553693 MRPS18AQ9NVS2 196 aaKnown RBP5.11□□□□□ -1.59
SCFD1-210ENST00000553693 HESX1Q9UBX0 185 aa5.11□□□□□ -1.59
SCFD1-210ENST00000553693 PCDHA1Q9Y5I3 950 aa5.11□□□□□ -1.59
SCFD1-210ENST00000553693 MANSC4A6NHS7 340 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-210ENST00000553693 TLR5O60602 858 aa5.1□□□□□ -1.59
SCFD1-210ENST00000553693 PRKCGP05129 697 aa5.1□□□□□ -1.59
SCFD1-210ENST00000553693 CT47B1P0C2W7 299 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-210ENST00000553693 ATXN1LP0C7T5 689 aaKnown RBP5.1□□□□□ -1.59
SCFD1-210ENST00000553693 NDUFB7P17568 137 aa5.1□□□□□ -1.59
SCFD1-210ENST00000553693 SRSF4Q08170 494 aaKnown RBP5.1□□□□□ -1.59
SCFD1-210ENST00000553693 SLC10A2Q12908 348 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-210ENST00000553693 PLS1Q14651 629 aa5.1□□□□□ -1.59
SCFD1-210ENST00000553693 LONRF3Q496Y0 759 aa5.1□□□□□ -1.59
SCFD1-210ENST00000553693 VPS53Q5VIR6 699 aa5.1□□□□□ -1.59
SCFD1-210ENST00000553693 ICE2Q659A1 982 aa5.1□□□□□ -1.59
SCFD1-210ENST00000553693 TMEM108Q6UXF1 575 aa5.1□□□□□ -1.59
SCFD1-210ENST00000553693 ZNF804AQ7Z570 1209 aa5.1□□□□□ -1.59
SCFD1-210ENST00000553693 FAM46DQ8NEK8 389 aa5.1□□□□□ -1.59
SCFD1-210ENST00000553693 SARS2Q9NP81 518 aaKnown RBP5.1□□□□□ -1.59
SCFD1-210ENST00000553693 TYW1Q9NV66 732 aaKnown RBP5.1□□□□□ -1.59
SCFD1-210ENST00000553693 ANKRD6Q9Y2G4 727 aa5.1□□□□□ -1.59
SCFD1-210ENST00000553693 STXBP5LQ9Y2K9 1186 aa5.1□□□□□ -1.59
SCFD1-210ENST00000553693 OFD1O75665 1012 aa5.09□□□□□ -1.59
SCFD1-210ENST00000553693 PF4V1P10720 104 aa5.09□□□□□ -1.59
SCFD1-210ENST00000553693 PPIFP30405 207 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms