RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	PPP1R2P3	Q6NXS1	205 aa		12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	TRIM72	Q6ZMU5	477 aa		12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	COLGALT1	Q8NBJ5	622 aa		12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	KBTBD7	Q8WVZ9	684 aa		12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	ZNF830	Q96NB3	372 aa	Predicted RBP	12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	AGPAT1	Q99943	283 aa		12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	OXCT2	Q9BYC2	517 aa	Predicted RBP	12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	KCNF1	Q9H3M0	494 aa		12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	DDX43	Q9NXZ2	648 aa	Known RBP	12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	HCST	Q9UBK5	93 aa		12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	STXBP5L	Q9Y2K9	1186 aa		12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	12.37	□□□□□ -0.43
CNOT2-223	ENST00000550160	EIF3CL	B5ME19	914 aa	Known RBP	12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	NT5C1B-RDH14	C9J2C7	533 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160		H7C4K7	107 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160		I3L4J1	428 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	HAX1	O00165	279 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	CCP110	O43303	1012 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	NDUFA10	O95299	355 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	PDGFRB	P09619	1106 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	TSPY1	Q01534	308 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	KRT17	Q04695	432 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	MAPRE1	Q15691	268 aa	Known RBP	12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	SLC18A3	Q16572	532 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	FAM171A1	Q5VUB5	890 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	TAF3	Q5VWG9	929 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	ZNF280D	Q6N043	979 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	KIAA1841	Q6NSI8	718 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	CD300LG	Q6UXG3	332 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	ANKS3	Q6ZW76	656 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	ACOT1	Q86TX2	421 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	NOP9	Q86U38	636 aa	Known RBP	12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	CEP57	Q86XR8	500 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	GLYCTK	Q8IVS8	523 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	CRYBG2	Q8N1P7	616 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	SLC39A11	Q8N1S5	342 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	SLC4A11	Q8NBS3	891 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	WHAMM	Q8TF30	809 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	IGSF21	Q96ID5	467 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	EIF3C	Q99613	913 aa	Known RBP	12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	ELOVL4	Q9GZR5	314 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	MARCH5	Q9NX47	278 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	HESX1	Q9UBX0	185 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	ADAMTS1	Q9UHI8	967 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	NOCT	Q9UK39	431 aa	Known RBP	12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	CDH9	Q9ULB4	789 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	EPN1	Q9Y6I3	576 aa	Predicted RBP	12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160	BRCA2	P51587	3418 aa		12.36	□□□□□ -0.43
CNOT2-223	ENST00000550160		F8W810	466 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	LSM8	O95777	96 aa	Known RBP	12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	PLEK	P08567	350 aa	Predicted RBP	12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	CCDC175	P0C221	793 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	FGFR3	P22607	806 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	BRD2	P25440	801 aa	Known RBP	12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	TKT	P29401	623 aa	Known RBP	12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	PBX3	P40426	434 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	SHH	Q15465	462 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	USP41	Q3LFD5	358 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	C9orf50	Q5SZB4	431 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	C10orf76	Q5T2E6	689 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	RAD9B	Q6WBX8	426 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	B3GALNT2	Q8NCR0	500 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	SLC20A1	Q8WUM9	679 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	ZNF606	Q8WXB4	792 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	CLP1	Q92989	425 aa	Known RBP	12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	TWNK	Q96RR1	684 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	SYT15	Q9BQS2	421 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	ACBD6	Q9BR61	282 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	TTPAL	Q9BTX7	342 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	RYDEN	Q9NUL5	291 aa	Known RBP	12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	HMGXB4	Q9UGU5	601 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	ZKSCAN5	Q9Y2L8	839 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	COL4A6	Q14031	1691 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	ATP8B3	O60423	1300 aa		12.35	□□□□□ -0.43
CNOT2-223	ENST00000550160	OR6C75	A6NL08	312 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160		H0YGN5	161 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	ZSCAN12	O43309	604 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	OAZ2	O95190	189 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	MME	P08473	750 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	PTPN1	P18031	435 aa	Known RBP	12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	IGFBP6	P24592	240 aa	Predicted RBP	12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	LMO2	P25791	158 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	SLC8A3	P57103	927 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	FMO1	Q01740	532 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	GFPT1	Q06210	699 aa	Predicted RBP	12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	ORC1	Q13415	861 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	CNGA2	Q16280	664 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	ALKBH5	Q6P6C2	394 aa	Known RBP	12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	DDX53	Q86TM3	631 aa	Known RBP	12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	DCP1B	Q8IZD4	617 aa	Known RBP	12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	MSANTD4	Q8NCY6	345 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	DDX1	Q92499	740 aa	Known RBP	12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	GDF15	Q99988	308 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	SYT11	Q9BT88	431 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	PLVAP	Q9BX97	442 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	GPR62	Q9BZJ7	368 aa		12.34	□□□□□ -0.43
CNOT2-223	ENST00000550160	ACP6	Q9NPH0	428 aa		12.34	□□□□□ -0.43

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