RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 KYAT1Q16773 422 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 LRRC36Q1X8D7 754 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 LRRC23Q53EV4 343 aaPredicted RBP15.21■□□□□ 0.03
CACNB1-206ENST00000539338 LVRNQ6Q4G3 990 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 FEZF2Q8TBJ5 459 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 EPAS1Q99814 870 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 DMGDHQ9UI17 866 aaKnown RBP15.21■□□□□ 0.03
CACNB1-206ENST00000539338 RBP3P10745 1247 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 PAPD7Q5XG87 772 aaKnown RBP15.21■□□□□ 0.03
CACNB1-206ENST00000539338 CAMKK2Q96RR4 588 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 L1RE1Q9UN81 338 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 PQBP1O60828 265 aaKnown RBP15.21■□□□□ 0.03
CACNB1-206ENST00000539338 ATF7IP2Q5U623 682 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 LRRC8EQ6NSJ5 796 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 CBWD2Q8IUF1 395 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 SLAIN1Q8ND83 568 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 C1orf131Q8NDD1 294 aaKnown RBP15.21■□□□□ 0.03
CACNB1-206ENST00000539338 APPL2Q8NEU8 664 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 ACER1Q8TDN7 264 aa15.21■□□□□ 0.03
CACNB1-206ENST00000539338 KCNA1Q09470 495 aa15.21■□□□□ 0.02
CACNB1-206ENST00000539338 MAPK7Q13164 816 aa15.21■□□□□ 0.02
CACNB1-206ENST00000539338 GIT2Q14161 759 aa15.21■□□□□ 0.02
CACNB1-206ENST00000539338 AAK1Q2M2I8 961 aa15.21■□□□□ 0.02
CACNB1-206ENST00000539338 CAPRIN2Q6IMN6 1127 aaKnown RBP15.21■□□□□ 0.02
CACNB1-206ENST00000539338 FAM71DQ8N9W8 422 aa15.21■□□□□ 0.02
CACNB1-206ENST00000539338 EGFL8Q99944 293 aa15.21■□□□□ 0.02
CACNB1-206ENST00000539338 SMARCAD1Q9H4L7 1026 aa15.21■□□□□ 0.02
CACNB1-206ENST00000539338 MRPL40Q9NQ50 206 aaKnown RBP15.21■□□□□ 0.02
CACNB1-206ENST00000539338 METTL5Q9NRN9 209 aaKnown RBP15.21■□□□□ 0.02
CACNB1-206ENST00000539338 GTF3C4Q9UKN8 822 aa15.21■□□□□ 0.02
CACNB1-206ENST00000539338 CCT8L1PA6NM43 557 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 HSD17B4P51659 736 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 LAMC2Q13753 1193 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 EPS8L3Q8TE67 593 aaKnown RBP15.2■□□□□ 0.02
CACNB1-206ENST00000539338 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.2■□□□□ 0.02
CACNB1-206ENST00000539338 MEGF6O75095 1541 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 TCRBV5S4A2TA0A5A2 114 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 ADM5C9JUS6 153 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 ACAD10Q6JQN1 1059 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 SH3TC2Q8TF17 1288 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 SNX19Q92543 992 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 NIF3L1Q9GZT8 377 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 AKR1A1P14550 325 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 ALDH7A1P49419 539 aaKnown RBP15.2■□□□□ 0.02
CACNB1-206ENST00000539338 CENPCQ03188 943 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 PPIL2Q13356 520 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 CES5AQ6NT32 575 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 TAS2R42Q7RTR8 314 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 RMDN1Q96DB5 314 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 UBE2OQ9C0C9 1292 aaKnown RBP15.2■□□□□ 0.02
CACNB1-206ENST00000539338 TMEM131LA2VDJ0 1609 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 H3BQF6 201 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 CPB1P15086 417 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 CBWD1Q9BRT8 395 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 ANKEF1Q9NU02 776 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 POLLQ9UGP5 575 aa15.2■□□□□ 0.02
CACNB1-206ENST00000539338 ARP10275 920 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 CCDC15Q0P6D6 951 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 CENPPQ6IPU0 288 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 SCFD1Q8WVM8 642 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 YY1AP1Q9H869 796 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 SLC28A3Q9HAS3 691 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 OSGEPQ9NPF4 335 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 RFC5P40937 340 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 ZNF235Q14590 738 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 FIGNQ5HY92 759 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 TEDDM1Q5T9Z0 273 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 MTHFD1LQ6UB35 978 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 LRRC34Q8IZ02 419 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 AGGF1Q8N302 714 aaeCLIP15.19■□□□□ 0.02
CACNB1-206ENST00000539338 AFF4Q9UHB7 1163 aaKnown RBP15.19■□□□□ 0.02
CACNB1-206ENST00000539338 MAP2P11137 1827 aaKnown RBP15.19■□□□□ 0.02
CACNB1-206ENST00000539338 DISP2A7MBM2 1401 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 RPS6KA5O75582 802 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 DNAJC3Q13217 504 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 STILQ15468 1287 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 COBLL1Q53SF7 1204 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 NT5C1AQ9BXI3 368 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 C17orf102A2RUQ5 167 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 C3orf70A6NLC5 250 aaPredicted RBP15.19■□□□□ 0.02
CACNB1-206ENST00000539338 MAGEB2O15479 319 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 KDM7AQ6ZMT4 941 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 ZNF571Q7Z3V5 609 aaPredicted RBP15.19■□□□□ 0.02
CACNB1-206ENST00000539338 ZNF677Q86XU0 584 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 SENP6Q9GZR1 1112 aaPredicted RBP15.19■□□□□ 0.02
CACNB1-206ENST00000539338 PABPC3Q9H361 631 aaKnown RBP15.19■□□□□ 0.02
CACNB1-206ENST00000539338 ANKZF1Q9H8Y5 726 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 SNRPFP62306 86 aaKnown RBP15.19■□□□□ 0.02
CACNB1-206ENST00000539338 RBBP7Q16576 425 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 SZRD1Q7Z422 152 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 CCDC90BQ9GZT6 254 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 RSAD1Q9HA92 442 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 SLC40A1Q9NP59 571 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 NMRK2Q9NPI5 230 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 IRAK4Q9NWZ3 460 aa15.19■□□□□ 0.02
CACNB1-206ENST00000539338 AKAP3O75969 853 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 KRT4P19013 534 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 GRIK1P39086 918 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 ARHGDIAP52565 204 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 EFCAB12Q6NXP0 572 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms