RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	SOWAHA	Q2M3V2	549 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CFAP221	Q4G0U5	840 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	INTS6L	Q5JSJ4	861 aa	Known RBP	13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	HFE2	Q6ZVN8	426 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	INTS8	Q75QN2	995 aa	Known RBP	13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	PDZD4	Q76G19	769 aa	Predicted RBP	13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	TMEM130	Q8N3G9	435 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	FBXL6	Q8N531	539 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	RDH13	Q8NBN7	331 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ATAD1	Q8NBU5	361 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	NOC3L	Q8WTT2	800 aa	Known RBP	13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	PBXIP1	Q96AQ6	731 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	E2F7	Q96AV8	911 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	FAXDC2	Q96IV6	333 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	LRRC3	Q9BY71	257 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	TRPV4	Q9HBA0	871 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CEP72	Q9P209	647 aa		13.21	□□□□□ -0.29
CLTCL1-205	ENST00000538828	FAM86C2P	A6NEL3	165 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	C4BPA	P04003	597 aa	Known RBP	13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	OR4Q2	P0C623	313 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	HAPLN1	P10915	354 aa	Predicted RBP	13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	MAGEA11	P43364	429 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	VEPH1	Q14D04	833 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	FAM171B	Q6P995	826 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ADGRF2	Q8IZF7	708 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ITFG1	Q8TB96	612 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ZNF516	Q92618	1163 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TAF4B	Q92750	862 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PKMYT1	Q99640	499 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	DNAJC25	Q9H1X3	360 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	HCFC1R1	Q9NWW0	138 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	DDX43	Q9NXZ2	648 aa	Known RBP	13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CDH9	Q9ULB4	789 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PCDHB5	Q9Y5E4	795 aa		13.2	□□□□□ -0.3
CLTCL1-205	ENST00000538828	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CST3	P01034	146 aa	Predicted RBP	13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	NR2F2	P24468	414 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	GTF2H1	P32780	548 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PSMC2	P35998	433 aa	Known RBP	13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CLCN5	P51795	746 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	NTHL1	P78549	312 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PFKP	Q01813	784 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TRPC3	Q13507	836 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SLC5A9	Q2M3M2	681 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ZACN	Q401N2	412 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SLC39A12	Q504Y0	691 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	C4orf50	Q6ZRC1	276 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	LRRTM3	Q86VH5	581 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TMC8	Q8IU68	726 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SUGP1	Q8IWZ8	645 aa	Known RBP	13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	KBTBD7	Q8WVZ9	684 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ELSPBP1	Q96BH3	223 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CCDC127	Q96BQ5	260 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TMEM209	Q96SK2	561 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CORO1B	Q9BR76	489 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	XYLT2	Q9H1B5	865 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CRISPLD1	Q9H336	500 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PCDHA5	Q9Y5H7	936 aa		13.19	□□□□□ -0.3
CLTCL1-205	ENST00000538828	KIN	O60870	393 aa	Known RBP	13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	MOSPD3	O75425	235 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CSH1	P0DML2	217 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CSH2	P0DML3	217 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	P4HA1	P13674	534 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CDC25C	P30307	473 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ANP32A	P39687	249 aa	Known RBP	13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	RPL10A	P62906	217 aa	Known RBP	13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	LRRC63	Q05C16	580 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ADAM9	Q13443	819 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PNOC	Q13519	176 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SGSM1	Q2NKQ1	1148 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PHLDB3	Q6NSJ2	640 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	VSTM1	Q6UX27	236 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PLEKHO2	Q8TD55	490 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	DEPDC1B	Q8WUY9	529 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	FGF14	Q92915	247 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SMARCE1	Q969G3	411 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	MYRFL	Q96LU7	910 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ASB16	Q96NS5	453 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PGLYRP2	Q96PD5	576 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TRPV5	Q9NQA5	729 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	OBP2A	Q9NY56	170 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	UXT	Q9UBK9	157 aa	Predicted RBP	13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	NUMBL	Q9Y6R0	609 aa		13.18	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PIEZO1	Q92508	2521 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CETN3	O15182	167 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PHACTR2	O75167	634 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	AKAP3	O75969	853 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	KRT13	P13646	458 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CEBPB	P17676	345 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	DDX6	P26196	483 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CCR2	P41597	374 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CASP4	P49662	377 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	VAMP7	P51809	220 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	MLLT6	P55198	1093 aa	Predicted RBP	13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	UBE2H	P62256	183 aa		13.17	□□□□□ -0.3

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