RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 FOXN2P32314 431 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 NF2P35240 595 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 CDKN2BP42772 138 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 WDR4P57081 412 aaKnown RBP9.41□□□□□ -0.9
PKP3-202ENST00000524646 RPL7AP62424 266 aaKnown RBP9.41□□□□□ -0.9
PKP3-202ENST00000524646 KCNJ2P63252 427 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 OGDHQ02218 1023 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 GPS1Q13098 491 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 PIGHQ14442 188 aaPredicted RBP9.41□□□□□ -0.9
PKP3-202ENST00000524646 TARBP2Q15633 366 aaKnown RBP9.41□□□□□ -0.9
PKP3-202ENST00000524646 TFDP3Q5H9I0 405 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 EFHC2Q5JST6 749 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 ZFYVE27Q5T4F4 411 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 NBPF12Q5TAG4 269 aaPredicted RBP9.41□□□□□ -0.9
PKP3-202ENST00000524646 FAM160B1Q5W0V3 765 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 KAZNQ674X7 775 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 CDCA2Q69YH5 1023 aaPredicted RBP9.41□□□□□ -0.9
PKP3-202ENST00000524646 DCUN1D2Q6PH85 259 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 SEPT14Q6ZU15 432 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 CENPUQ71F23 418 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 TBC1D1Q86TI0 1168 aaPredicted RBP9.41□□□□□ -0.9
PKP3-202ENST00000524646 PRUNE1Q86TP1 453 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 GLIS1Q8NBF1 620 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 DNERQ8NFT8 737 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 GIMAP7Q8NHV1 300 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 SLC35B2Q8TB61 432 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 TCP11Q8WWU5 503 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 ZNF606Q8WXB4 792 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 JDP2Q8WYK2 163 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 FAM167AQ96KS9 214 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 WRNIP1Q96S55 665 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 MRPL4Q9BYD3 311 aaKnown RBP9.41□□□□□ -0.9
PKP3-202ENST00000524646 VPS37BQ9H9H4 285 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 SSU72Q9NP77 194 aaKnown RBP9.41□□□□□ -0.9
PKP3-202ENST00000524646 TXLNGQ9NUQ3 528 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 KLHL14Q9P2G3 628 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 PSMC3IPQ9P2W1 217 aaPredicted RBP9.41□□□□□ -0.9
PKP3-202ENST00000524646 FETUBQ9UGM5 382 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 BAIAP2L1Q9UHR4 511 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 HACL1Q9UJ83 578 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 STRIP2Q9ULQ0 834 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 ZNF148Q9UQR1 794 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 STARD13Q9Y3M8 1113 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.41□□□□□ -0.9
PKP3-202ENST00000524646 EP400Q96L91 3159 aa9.41□□□□□ -0.9
PKP3-202ENST00000524646 OGTO15294 1046 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 ASMTLO95671 621 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 TSHRP16473 764 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 ELF1P32519 619 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 GMPSP49915 693 aaPredicted RBP9.4□□□□□ -0.9
PKP3-202ENST00000524646 EFNA5P52803 228 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 IRX3P78415 501 aaPredicted RBP9.4□□□□□ -0.9
PKP3-202ENST00000524646 LACTBP83111 547 aaPredicted RBP9.4□□□□□ -0.9
PKP3-202ENST00000524646 MGAT5Q09328 741 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 ZNF268Q14587 947 aaPredicted RBP9.4□□□□□ -0.9
PKP3-202ENST00000524646 FASTKD3Q14CZ7 662 aaKnown RBP9.4□□□□□ -0.9
PKP3-202ENST00000524646 STXBP2Q15833 593 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 PDK4Q16654 411 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 HIF1AQ16665 826 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 ZNF699Q32M78 642 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 NOL9Q5SY16 702 aaKnown RBP9.4□□□□□ -0.9
PKP3-202ENST00000524646 GPAT2Q6NUI2 795 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 CATSPERGQ6ZRH7 1159 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 BBS12Q6ZW61 710 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 ASRGL1Q7L266 308 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 PCGF5Q86SE9 256 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 PNMA8AQ86V59 439 aaPredicted RBP9.4□□□□□ -0.9
PKP3-202ENST00000524646 CEP57Q86XR8 500 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 ECHDC2Q86YB7 292 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 APOBEC3FQ8IUX4 373 aaKnown RBP9.4□□□□□ -0.9
PKP3-202ENST00000524646 ZBTB8OSQ8IWT0 167 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 MICALL2Q8IY33 904 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 ANKLE1Q8NAG6 615 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 ATP11CQ8NB49 1132 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 TTC13Q8NBP0 860 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 CHST13Q8NET6 341 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 DENND1AQ8TEH3 1009 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 KLHL29Q96CT2 875 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 CAMKK2Q96RR4 588 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 SMC6Q96SB8 1091 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 MTMR12Q9C0I1 747 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 CISHQ9NSE2 258 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 PNMA3Q9UL41 463 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 EFR3BQ9Y2G0 817 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 FARP1Q9Y4F1 1045 aaPredicted RBP9.4□□□□□ -0.9
PKP3-202ENST00000524646 IVNS1ABPQ9Y6Y0 642 aa9.4□□□□□ -0.9
PKP3-202ENST00000524646 PLXNB2O15031 1838 aa9.4□□□□□ -0.91
PKP3-202ENST00000524646 TRIP11Q15643 1979 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 CLUHO75153 1309 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 POC1B-GALNT4F8VUJ3 575 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 SGK1O00141 431 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 SMAPO00193 183 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 ABLIM1O14639 778 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 ALOX15BO15296 676 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 GAS2O43903 313 aaKnown RBP9.39□□□□□ -0.91
PKP3-202ENST00000524646 EDF1O60869 148 aaKnown RBP9.39□□□□□ -0.91
PKP3-202ENST00000524646 SPAG7O75391 227 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 TOM1L1O75674 476 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 FARP2O94887 1054 aaPredicted RBP9.39□□□□□ -0.91
PKP3-202ENST00000524646 PRKCBP05771 671 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms