RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 QRICH2Q9H0J4 1663 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 DLC1Q96QB1 1528 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 CCDC78A2IDD5 438 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 FZD7O75084 574 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 AGFG2O95081 481 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 FCER1AP12319 257 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 FGFR4P22455 802 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 IDI1Q13907 227 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 UTP14CQ5TAP6 766 aaKnown RBP8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 MRGPREQ86SM8 312 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 MARS2Q96GW9 593 aaKnown RBP8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 PNKPQ96T60 521 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 MMRN2Q9H8L6 949 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 GABBR1Q9UBS5 961 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 KCNE5Q9UJ90 142 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 SLC45A2Q9UMX9 530 aa8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 ARHGEF28Q8N1W1 1705 aaKnown RBP8.56□□□□□ -1.04
TRAPPC11-206ENST00000509857 HLA-DOAP06340 250 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 MAKP20794 623 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 PIK3CGP48736 1102 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 MLC1Q15049 377 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 MINDY4Q4G0A6 757 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 B3GNTL1Q67FW5 361 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 TMEM132CQ8N3T6 1108 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 AOPEPQ8N6M6 819 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 CPEB3Q8NE35 698 aaKnown RBP8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 KLHL32Q96NJ5 620 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 ACO2Q99798 780 aaKnown RBP8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 ADAM2Q99965 735 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 ZSWIM1Q9BR11 485 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 MRPL46Q9H2W6 279 aaKnown RBP8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 PNPOQ9NVS9 261 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 HSFX1Q9UBD0 423 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 ZDHHC8Q9ULC8 765 aa8.55□□□□□ -1.04
TRAPPC11-206ENST00000509857 EVC2Q86UK5 1308 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 TSPOAP1O95153 1857 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 CLTCQ00610 1675 aaKnown RBP8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 CENPVL1A0A0U1RR11 272 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 PRSS29PA6NIE9 313 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 ERC2O15083 957 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 NDUFA10O95299 355 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 MATN4O95460 622 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 MCM7P33993 719 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 ACVRL1P37023 503 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 ABHD18Q0P651 414 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 PLS1Q14651 629 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 TIGD2Q4W5G0 525 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 MYO1HQ8N1T3 1032 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 KLHDC4Q8TBB5 520 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 SCAMP4Q969E2 229 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 TSR2Q969E8 191 aaKnown RBP8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 FUBP1Q96AE4 644 aaKnown RBP8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 MED15Q96RN5 788 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 LRFN3Q9BTN0 628 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 CFAP97Q9P2B7 532 aa8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 REXO2Q9Y3B8 237 aaKnown RBP8.54□□□□□ -1.04
TRAPPC11-206ENST00000509857 POLR3AO14802 1390 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 A0A088AWK7 358 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 B3GALT2O43825 422 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 UBXN7O94888 489 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 GNAI3P08754 354 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 DDX6P26196 483 aaKnown RBP eCLIP8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 HTR1BP28222 390 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 GNAI1P63096 354 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 HSD11B2P80365 405 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 KIF22Q14807 665 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 EMC10Q5UCC4 262 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 ARHGEF19Q8IW93 802 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 FAM43AQ8N2R8 423 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 CAMKK1Q8N5S9 505 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 ZBTB34Q8NCN2 500 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 TMIEQ8NEW7 156 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 PPP1R35Q8TAP8 253 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 SLC35A4Q96G79 324 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 BOD1Q96IK1 185 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 C1orf43Q9BWL3 253 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 TLR10Q9BXR5 811 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 BRD9Q9H8M2 597 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 GPR35Q9HC97 309 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 TMEM74BQ9NUR3 256 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 USP25Q9UHP3 1055 aa8.53□□□□□ -1.04
TRAPPC11-206ENST00000509857 MED14O60244 1454 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 ANKRD36BQ8N2N9 1353 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 TUSC2O75896 110 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 ABHD16AO95870 558 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 GPANK1O95872 356 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 GJB1P08034 283 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 PPP2R1AP30153 589 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 AGFG1P52594 562 aaKnown RBP8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 MXRA7P84157 204 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 RESTQ13127 1097 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 PPP1R3BQ86XI6 285 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 Q8NA96 180 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 PLBD2Q8NHP8 589 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 MTFMTQ96DP5 389 aaKnown RBP8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 MLST8Q9BVC4 326 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 MAP3K2Q9Y2U5 619 aa8.52□□□□□ -1.05
TRAPPC11-206ENST00000509857 A2ML1A8K2U0 1454 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 AATKQ6ZMQ8 1374 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 H3BUI4 141 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms