RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, human

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-223	ENST00000508608	PORCN	Q9H237	461 aa		13.76	□□□□□ -0.21
CAST-223	ENST00000508608	ANKFY1	Q9P2R3	1169 aa		13.76	□□□□□ -0.21
CAST-223	ENST00000508608	IVNS1ABP	Q9Y6Y0	642 aa		13.76	□□□□□ -0.21
CAST-223	ENST00000508608	LRRIQ4	A6NIV6	560 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608		A8MUI8	341 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	SGK1	O00141	431 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	HGS	O14964	777 aa	Predicted RBP	13.75	□□□□□ -0.21
CAST-223	ENST00000508608	SUPT20HL2	P0C7V6	817 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	SSTR3	P32745	418 aa	Predicted RBP	13.75	□□□□□ -0.21
CAST-223	ENST00000508608	OAZ1	P54368	228 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	GEMIN4	P57678	1058 aa	Known RBP	13.75	□□□□□ -0.21
CAST-223	ENST00000508608	PDIA2	Q13087	525 aa	Known RBP	13.75	□□□□□ -0.21
CAST-223	ENST00000508608	DGKZ	Q13574	1117 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	SUPT20HL1	Q3ZLR7	823 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	ATP13A4	Q4VNC1	1196 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	EFHC2	Q5JST6	749 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	FYB2	Q5VWT5	728 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	SMYD5	Q6GMV2	418 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	NIPA2	Q8N8Q9	360 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	ATG4C	Q96DT6	458 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	THOC1	Q96FV9	657 aa	Known RBP	13.75	□□□□□ -0.21
CAST-223	ENST00000508608	VPS33B	Q9H267	617 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	ZNF541	Q9H0D2	1346 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608		A0A0B4J269	797 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	LRRD1	A4D1F6	860 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	ZSCAN5DP	P0CG00	497 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	RPA3	P35244	121 aa	Predicted RBP	13.75	□□□□□ -0.21
CAST-223	ENST00000508608	PLCB3	Q01970	1234 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	ZNF252P-AS1	Q0IIN9	211 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	FASTKD3	Q14CZ7	662 aa	Known RBP	13.75	□□□□□ -0.21
CAST-223	ENST00000508608	POLN	Q7Z5Q5	900 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	NIM1K	Q8IY84	436 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	C4orf33	Q8N1A6	199 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	UBR7	Q8N806	425 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	ATP11C	Q8NB49	1132 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	ZNF398	Q8TD17	642 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	HAPLN2	Q9GZV7	340 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.75	□□□□□ -0.21
CAST-223	ENST00000508608	ZNRF3	Q9ULT6	936 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	SUFU	Q9UMX1	484 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	CHKB	Q9Y259	395 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	EFR3B	Q9Y2G0	817 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	CEP83	Q9Y592	693 aa		13.75	□□□□□ -0.21
CAST-223	ENST00000508608	TYROBP	O43914	113 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	HNRNPCL1	O60812	293 aa	Known RBP	13.74	□□□□□ -0.21
CAST-223	ENST00000508608	DIAPH2	O60879	1101 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	TCF4	P15884	667 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	CDKN2B	P42772	138 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	CCNG1	P51959	295 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	GRM1	Q13255	1194 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	KLHL38	Q2WGJ6	581 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.74	□□□□□ -0.21
CAST-223	ENST00000508608	SNRNP48	Q6IEG0	339 aa	Known RBP	13.74	□□□□□ -0.21
CAST-223	ENST00000508608	ERICH1	Q86X53	443 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	TTLL6	Q8N841	843 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	TTC13	Q8NBP0	860 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	SLC7A3	Q8WY07	619 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	STRIP2	Q9ULQ0	834 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	RLF	Q13129	1914 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	CNTNAP2	Q9UHC6	1331 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	TCRBV5S1A1T	A0A578	114 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608		E7ENQ6	273 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608		F8VP50	259 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	SMAP	O00193	183 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	RGS20	O76081	388 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	ASS1	P00966	412 aa	Known RBP	13.74	□□□□□ -0.21
CAST-223	ENST00000508608	OAT	P04181	439 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	ETS1	P14921	441 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	GLRA2	P23416	452 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	ARL4C	P56559	192 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	SEPT7	Q16181	437 aa	Known RBP	13.74	□□□□□ -0.21
CAST-223	ENST00000508608	WDR49	Q8IV35	697 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	PPIL6	Q8IXY8	311 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	OR5B17	Q8NGF7	314 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	SLC35B2	Q8TB61	432 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	ASAP3	Q8TDY4	903 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	TMEM143	Q96AN5	459 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	ZBTB45	Q96K62	511 aa	Predicted RBP	13.74	□□□□□ -0.21
CAST-223	ENST00000508608	DHX33	Q9H6R0	707 aa	Known RBP	13.74	□□□□□ -0.21
CAST-223	ENST00000508608	TMEM134	Q9H6X4	195 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	KIF9	Q9HAQ2	790 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	FBXO40	Q9UH90	709 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	RIPK3	Q9Y572	518 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	ADGRA2	Q96PE1	1338 aa		13.74	□□□□□ -0.21
CAST-223	ENST00000508608	SPATA31C2	B4DYI2	1134 aa		13.73	□□□□□ -0.21
CAST-223	ENST00000508608	LUC7L3	O95232	432 aa	Known RBP	13.73	□□□□□ -0.21
CAST-223	ENST00000508608	IFNB1	P01574	187 aa		13.73	□□□□□ -0.21
CAST-223	ENST00000508608	TROVE2	P10155	538 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
CAST-223	ENST00000508608	ARL2	P36404	184 aa		13.73	□□□□□ -0.21
CAST-223	ENST00000508608	BRSK2	Q8IWQ3	736 aa		13.73	□□□□□ -0.21
CAST-223	ENST00000508608	C10orf82	Q8WW14	230 aa		13.73	□□□□□ -0.21
CAST-223	ENST00000508608	TARS2	Q9BW92	718 aa	Known RBP	13.73	□□□□□ -0.21
CAST-223	ENST00000508608	MAF1	Q9H063	256 aa		13.73	□□□□□ -0.21
CAST-223	ENST00000508608	MYOZ2	Q9NPC6	264 aa		13.73	□□□□□ -0.21
CAST-223	ENST00000508608	SLCO1B3	Q9NPD5	702 aa		13.73	□□□□□ -0.21
CAST-223	ENST00000508608	ZNF302	Q9NR11	478 aa		13.73	□□□□□ -0.21
CAST-223	ENST00000508608	RPL26L1	Q9UNX3	145 aa	Known RBP	13.73	□□□□□ -0.21
CAST-223	ENST00000508608	AGTPBP1	Q9UPW5	1226 aa		13.73	□□□□□ -0.21
CAST-223	ENST00000508608	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.73	□□□□□ -0.21
CAST-223	ENST00000508608	TM9SF1	O15321	606 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms