RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PARD3BQ8TEW8 1205 aa18.92■□□□□ 0.62
HDAC4-211ENST00000494800 MCRS1Q96EZ8 462 aa18.92■□□□□ 0.62
HDAC4-211ENST00000494800 GPR88Q9GZN0 384 aa18.92■□□□□ 0.62
HDAC4-211ENST00000494800 CHMP5Q9NZZ3 219 aa18.92■□□□□ 0.62
HDAC4-211ENST00000494800 SCN1AP35498 2009 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 TSC2P49815 1807 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 MAPK13O15264 365 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 KRT13P13646 458 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 CEBPBP17676 345 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 EPHA5P54756 1037 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 MAPRE1Q15691 268 aaKnown RBP18.91■□□□□ 0.62
HDAC4-211ENST00000494800 WDR72Q3MJ13 1102 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 INTS6LQ5JSJ4 861 aaKnown RBP18.91■□□□□ 0.62
HDAC4-211ENST00000494800 PRSS36Q5K4E3 855 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 PARM1Q6UWI2 310 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 TMC2Q8TDI7 906 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 PSMG2Q969U7 264 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 CRISPLD1Q9H336 500 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 SNX25Q9H3E2 840 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 SMOC2Q9H3U7 446 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 ABCB6Q9NP58 842 aa18.91■□□□□ 0.62
HDAC4-211ENST00000494800 LRRIQ3A6PVS8 624 aaPredicted RBP18.9■□□□□ 0.62
HDAC4-211ENST00000494800 GABRDO14764 452 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 IKBKBO14920 756 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 STAU1O95793 577 aaKnown RBP18.9■□□□□ 0.62
HDAC4-211ENST00000494800 CST3P01034 146 aaPredicted RBP18.9■□□□□ 0.62
HDAC4-211ENST00000494800 FAM163BP0C2L3 166 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 RFX1P22670 979 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 ACAT1P24752 427 aaKnown RBP18.9■□□□□ 0.62
HDAC4-211ENST00000494800 PSMC2P35998 433 aaKnown RBP18.9■□□□□ 0.62
HDAC4-211ENST00000494800 CASP4P49662 377 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 CLDN10P78369 228 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 STIM1Q13586 685 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 EDRF1Q3B7T1 1238 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 ZNF658Q5TYW1 1059 aaPredicted RBP18.9■□□□□ 0.62
HDAC4-211ENST00000494800 INTS8Q75QN2 995 aaKnown RBP18.9■□□□□ 0.62
HDAC4-211ENST00000494800 LRRTM3Q86VH5 581 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 SPATA2LQ8IUW3 424 aaPredicted RBP18.9■□□□□ 0.62
HDAC4-211ENST00000494800 ELOA2Q8IYF1 753 aaPredicted RBP18.9■□□□□ 0.62
HDAC4-211ENST00000494800 HS6ST3Q8IZP7 471 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 ZNF516Q92618 1163 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 FGF14Q92915 247 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 GCNAQ96QF7 691 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 TSG101Q99816 390 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 KCNH6Q9H252 994 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 SLITRK6Q9H5Y7 841 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 WNT16Q9UBV4 365 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 CDH9Q9ULB4 789 aa18.9■□□□□ 0.62
HDAC4-211ENST00000494800 ARIH1Q9Y4X5 557 aaPredicted RBP18.9■□□□□ 0.62
HDAC4-211ENST00000494800 NARSO43776 548 aaKnown RBP18.89■□□□□ 0.61
HDAC4-211ENST00000494800 CFHP08603 1231 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 HAPLN1P10915 354 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-211ENST00000494800 P4HA1P13674 534 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 WARSP23381 471 aaKnown RBP18.89■□□□□ 0.61
HDAC4-211ENST00000494800 MYL6P60660 151 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 RPL10AP62906 217 aaKnown RBP18.89■□□□□ 0.61
HDAC4-211ENST00000494800 ADAM9Q13443 819 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 NCOA4Q13772 614 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 ZNF699Q32M78 642 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 ARHGAP15Q53QZ3 475 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 SCARA3Q6AZY7 606 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 C4orf50Q6ZRC1 276 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 DNAJB7Q7Z6W7 309 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-211ENST00000494800 FAM186BQ8IYM0 893 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 TTC9BQ8N6N2 239 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 TCEAL4Q96EI5 215 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 GZF1Q9H116 711 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-211ENST00000494800 DNAJC25Q9H1X3 360 aa18.89■□□□□ 0.61
HDAC4-211ENST00000494800 NXF1Q9UBU9 619 aaKnown RBP18.89■□□□□ 0.61
HDAC4-211ENST00000494800 TACC1O75410 805 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 ECI2O75521 394 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 SOAT2O75908 522 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 GNL1P36915 607 aaPredicted RBP18.88■□□□□ 0.61
HDAC4-211ENST00000494800 PPP1R2P41236 205 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 CCR2P41597 374 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 VAMP7P51809 220 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 PFKPQ01813 784 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 ENPEPQ07075 957 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 COBLL1Q53SF7 1204 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 ZNF667Q5HYK9 610 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 TDRD10Q5VZ19 366 aaKnown RBP18.88■□□□□ 0.61
HDAC4-211ENST00000494800 LIMS2Q7Z4I7 341 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 OSTM1Q86WC4 334 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 SMYD4Q8IYR2 804 aaPredicted RBP18.88■□□□□ 0.61
HDAC4-211ENST00000494800 SIX5Q8N196 739 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 PLEKHO2Q8TD55 490 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 ELSPBP1Q96BH3 223 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 FUBP3Q96I24 572 aaKnown RBP eCLIP18.88■□□□□ 0.61
HDAC4-211ENST00000494800 PRRX2Q99811 253 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 KXD1Q9BQD3 176 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 SYT15Q9BQS2 421 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 PI4K2AQ9BTU6 479 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 IMPG2Q9BZV3 1241 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 ZFP14Q9HCL3 533 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 SLC2A4RGQ9NR83 387 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 GTF3C4Q9UKN8 822 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 PCDHA5Q9Y5H7 936 aa18.88■□□□□ 0.61
HDAC4-211ENST00000494800 A0A1W2PRU2 124 aa18.87■□□□□ 0.61
HDAC4-211ENST00000494800 CETN3O15182 167 aa18.87■□□□□ 0.61
HDAC4-211ENST00000494800 AKAP3O75969 853 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms