RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 ENGASEQ8NFI3 743 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 ASAP3Q8TDY4 903 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 ATP2A3Q93084 1043 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 DNAJC25Q9H1X3 360 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 KIF9Q9HAQ2 790 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 TDP1Q9NUW8 608 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 SLC38A7Q9NVC3 462 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 DUS2Q9NX74 493 aaKnown RBP12.63□□□□□ -0.39
HDAC6-233ENST00000489352 IL17BQ9UHF5 180 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 SLC27A5Q9Y2P5 690 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 ANKRD17O75179 2603 aaKnown RBP12.62□□□□□ -0.39
HDAC6-233ENST00000489352 ENO4A6NNW6 628 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 ZBTB24O43167 697 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-233ENST00000489352 IFNAR2P48551 515 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 YARSP54577 528 aaKnown RBP12.62□□□□□ -0.39
HDAC6-233ENST00000489352 MRPS21P82921 87 aaKnown RBP12.62□□□□□ -0.39
HDAC6-233ENST00000489352 PRPF4BQ13523 1007 aaKnown RBP12.62□□□□□ -0.39
HDAC6-233ENST00000489352 PFKFB3Q16875 520 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-233ENST00000489352 MAP7D1Q3KQU3 841 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 B3GNT9Q6UX72 402 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 TMEM92Q6UXU6 159 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 C4orf19Q8IY42 314 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 MAB21L3Q8N8X9 362 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 DDX12PQ92771 950 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 EZH1Q92800 747 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-233ENST00000489352 LXNQ9BS40 222 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 SLC46A2Q9BY10 475 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 LRRC2Q9BYS8 371 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 IL25Q9H293 177 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 PDZD7Q9H5P4 517 aa12.62□□□□□ -0.39
HDAC6-233ENST00000489352 HEMK1Q9Y5R4 338 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-233ENST00000489352 CITO14578 2027 aa12.61□□□□□ -0.39
HDAC6-233ENST00000489352 TCRBV21S2A2A0A5A6 115 aa12.61□□□□□ -0.39
HDAC6-233ENST00000489352 ADAMTS3O15072 1205 aa12.61□□□□□ -0.39
HDAC6-233ENST00000489352 ZBTB43O43298 467 aa12.61□□□□□ -0.39
HDAC6-233ENST00000489352 TLX3O43711 291 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-233ENST00000489352 KLF8O95600 359 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-233ENST00000489352 LIG1P18858 919 aa12.61□□□□□ -0.39
HDAC6-233ENST00000489352 HNF1BP35680 557 aa12.61□□□□□ -0.39
HDAC6-233ENST00000489352 YWHAHQ04917 246 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-233ENST00000489352 LY6DQ14210 128 aa12.61□□□□□ -0.39
HDAC6-233ENST00000489352 SMAD1Q15797 465 aaKnown RBP12.61□□□□□ -0.39
HDAC6-233ENST00000489352 EOGTQ5NDL2 527 aa12.61□□□□□ -0.39
HDAC6-233ENST00000489352 TXNDC5Q8NBS9 432 aaKnown RBP12.61□□□□□ -0.39
HDAC6-233ENST00000489352 OXCT2Q9BYC2 517 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-233ENST00000489352 TOPORSQ9NS56 1045 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-233ENST00000489352 CCL26Q9Y258 94 aa12.61□□□□□ -0.39
HDAC6-233ENST00000489352 COL5A1P20908 1838 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-233ENST00000489352 DOPEY1Q5JWR5 2465 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 SMIM28A0A1B0GU29 152 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 K7EQS6 105 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 EML1O00423 815 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 NDUFS2O75306 463 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 DGAT1O75907 488 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 CER1O95813 267 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 JUPP14923 745 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 GLRA2P23416 452 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 RPL9P32969 192 aaKnown RBP12.6□□□□□ -0.39
HDAC6-233ENST00000489352 GRIK2Q13002 908 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 SUZ12Q15022 739 aaKnown RBP12.6□□□□□ -0.39
HDAC6-233ENST00000489352 DCAF4L1Q3SXM0 396 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 BROXQ5VW32 411 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 APOA5Q6Q788 366 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 PPP4R3CPQ6ZMV5 832 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 USP37Q86T82 979 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 SGMS1Q86VZ5 419 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 TMPRSS12Q86WS5 348 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 ALLCQ8N6M5 410 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
HDAC6-233ENST00000489352 TRIML1Q8N9V2 468 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 TBCKQ8TEA7 893 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 USP13Q92995 863 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-233ENST00000489352 SUSD3Q96L08 255 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 HSPA12BQ96MM6 686 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 C22orf23Q9BZE7 217 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 FAM117AQ9C073 453 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 ZSWIM4Q9H7M6 989 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 XPNPEP1Q9NQW7 623 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 TM7SF3Q9NS93 570 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 TOR4AQ9NXH8 423 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 WRAP73Q9P2S5 460 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-233ENST00000489352 NAP1L2Q9ULW6 460 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-233ENST00000489352 CREBBPQ92793 2442 aa12.6□□□□□ -0.39
HDAC6-233ENST00000489352 MYO18AQ92614 2054 aaKnown RBP12.6□□□□□ -0.39
HDAC6-233ENST00000489352 GOLGA8AA7E2F4 631 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 GOLGA8BA8MQT2 603 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 FLRT2O43155 660 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 OR4Q2P0C623 313 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 DDX6P26196 483 aaKnown RBP eCLIP12.59□□□□□ -0.39
HDAC6-233ENST00000489352 ADSSP30520 456 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 TIE1P35590 1138 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 ARL2P36404 184 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 AKAP17AQ02040 695 aaKnown RBP12.59□□□□□ -0.39
HDAC6-233ENST00000489352 CCDC173Q0VFZ6 552 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 FUT2Q10981 343 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 HSF5Q4G112 596 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-233ENST00000489352 WDR45BQ5MNZ6 344 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 CENPPQ6IPU0 288 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 CCDC148Q8NFR7 591 aa12.59□□□□□ -0.39
HDAC6-233ENST00000489352 BEST2Q8NFU1 509 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms