RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 STAP2Q9UGK3 403 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 TPCN1Q9ULQ1 816 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 DMTF1Q9Y222 760 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 RUVBL1Q9Y265 456 aaKnown RBP5.65□□□□□ -1.5
SMC4-218ENST00000486711 ACTL7AQ9Y615 435 aa5.65□□□□□ -1.5
SMC4-218ENST00000486711 ALAS1P13196 640 aa5.64□□□□□ -1.51
SMC4-218ENST00000486711 FPR1P21462 350 aa5.64□□□□□ -1.51
SMC4-218ENST00000486711 PCSK1P29120 753 aa5.64□□□□□ -1.51
SMC4-218ENST00000486711 RARRES1P49788 294 aa5.64□□□□□ -1.51
SMC4-218ENST00000486711 MRPS35P82673 323 aaKnown RBP5.64□□□□□ -1.51
SMC4-218ENST00000486711 ATP8B2P98198 1209 aa5.64□□□□□ -1.51
SMC4-218ENST00000486711 FLYWCH1Q4VC44 716 aa5.64□□□□□ -1.51
SMC4-218ENST00000486711 PLBD2Q8NHP8 589 aa5.64□□□□□ -1.51
SMC4-218ENST00000486711 PARD3BQ8TEW8 1205 aa5.64□□□□□ -1.51
SMC4-218ENST00000486711 STRBPQ96SI9 672 aaKnown RBP5.64□□□□□ -1.51
SMC4-218ENST00000486711 CHMP4AQ9BY43 222 aa5.64□□□□□ -1.51
SMC4-218ENST00000486711 C11orf54Q9H0W9 315 aaPredicted RBP5.64□□□□□ -1.51
SMC4-218ENST00000486711 PHTF1Q9UMS5 762 aa5.64□□□□□ -1.51
SMC4-218ENST00000486711 MTO1Q9Y2Z2 717 aaKnown RBP5.64□□□□□ -1.51
SMC4-218ENST00000486711 SALL3Q9BXA9 1300 aa5.64□□□□□ -1.51
SMC4-218ENST00000486711 PLEKHD1A6NEE1 506 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 FRS3O43559 492 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 LDHAP00338 332 aaKnown RBP5.63□□□□□ -1.51
SMC4-218ENST00000486711 IGLV2-14P01704 120 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 CD1AP06126 327 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 GNAI3P08754 354 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 MTHFD1P11586 935 aaKnown RBP5.63□□□□□ -1.51
SMC4-218ENST00000486711 CKBP12277 381 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 SLC6A2P23975 617 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 GNAI1P63096 354 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 CYP2A13Q16696 494 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 LONRF1Q17RB8 773 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 LONRF3Q496Y0 759 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 KHDC1LQ5JSQ8 128 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 COLGALT2Q8IYK4 626 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 ACRBPQ8NEB7 543 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 ACTRT2Q8TDY3 377 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 MYD88Q99836 296 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 AIFM2Q9BRQ8 373 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 APOL5Q9BWW9 433 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 ZMAT3Q9HA38 289 aaKnown RBP5.63□□□□□ -1.51
SMC4-218ENST00000486711 SEMA4GQ9NTN9 838 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 FBXO34Q9NWN3 711 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 SIDT1Q9NXL6 827 aaKnown RBP5.63□□□□□ -1.51
SMC4-218ENST00000486711 CPA4Q9UI42 421 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 PCDHA1Q9Y5I3 950 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 AATKQ6ZMQ8 1374 aa5.63□□□□□ -1.51
SMC4-218ENST00000486711 MYADML2A6NDP7 307 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 RHPN2P1A8MT19 583 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 ERN1O75460 977 aaKnown RBP5.62□□□□□ -1.51
SMC4-218ENST00000486711 EIF3JO75822 258 aaKnown RBP5.62□□□□□ -1.51
SMC4-218ENST00000486711 MYF5P13349 255 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 RPL17P18621 184 aaKnown RBP5.62□□□□□ -1.51
SMC4-218ENST00000486711 PRDX5P30044 214 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 VAV2P52735 878 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 ATXN1P54253 815 aaKnown RBP5.62□□□□□ -1.51
SMC4-218ENST00000486711 CACNA2D1P54289 1103 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 NHLH1Q02575 133 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 PABPC1LQ4VXU2 614 aaKnown RBP5.62□□□□□ -1.51
SMC4-218ENST00000486711 ZNF362Q5T0B9 420 aaPredicted RBP5.62□□□□□ -1.51
SMC4-218ENST00000486711 SWSAP1Q6NVH7 229 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 APOA5Q6Q788 366 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 MORC1Q86VD1 984 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 FAM186BQ8IYM0 893 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 KRT78Q8N1N4 520 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 FITM2Q8N6M3 262 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 AOPEPQ8N6M6 819 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 NACC2Q96BF6 587 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 PTCD3Q96EY7 689 aaKnown RBP5.62□□□□□ -1.51
SMC4-218ENST00000486711 APIPQ96GX9 242 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 NT5C1BQ96P26 610 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 NAA15Q9BXJ9 866 aaKnown RBP5.62□□□□□ -1.51
SMC4-218ENST00000486711 PACSIN1Q9BY11 444 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 C22orf23Q9BZE7 217 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 BTBD1Q9H0C5 482 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 UNKLQ9H9P5 680 aaKnown RBP5.62□□□□□ -1.51
SMC4-218ENST00000486711 NLRC4Q9NPP4 1024 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 PIH1D1Q9NWS0 290 aaKnown RBP5.62□□□□□ -1.51
SMC4-218ENST00000486711 KCTD5Q9NXV2 234 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 FOXJ2Q9P0K8 574 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 SLC23A1Q9UHI7 598 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 OGDHLQ9ULD0 1010 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 PCDHA6Q9UN73 950 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 RIPOR2Q9Y4F9 1068 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 SNX13Q9Y5W8 968 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 KAT6AQ92794 2004 aa5.62□□□□□ -1.51
SMC4-218ENST00000486711 CCDC78A2IDD5 438 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 INO80B-WBP1J3KQ70 363 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 F2RL2O00254 374 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 FOXN3O00409 490 aaPredicted RBP5.61□□□□□ -1.51
SMC4-218ENST00000486711 KIAA0391O15091 583 aaKnown RBP5.61□□□□□ -1.51
SMC4-218ENST00000486711 GRM6O15303 877 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 PRSS23O95084 383 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 KITP10721 976 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 SLC5A1P13866 664 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 SLC7A1P30825 629 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 PIK3CGP48736 1102 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 MORC3Q14149 939 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 UBE3BQ7Z3V4 1068 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 SRLQ86TD4 932 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms