RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 SURF1Q15526 300 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 MAPKAPK3Q16644 382 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 ZNF792Q3KQV3 632 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 ANKRD45Q5TZF3 282 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 AGAP9Q5VTM2 703 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 KLHL17Q6TDP4 642 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 SEM1Q6ZVN7 128 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 FRMD5Q7Z6J6 570 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 YAF2Q8IY57 180 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 RTKN2Q8IZC4 609 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 SNRNP27Q8WVK2 155 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 ZCCHC14Q8WYQ9 949 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 SPSB4Q96A44 273 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 WRNIP1Q96S55 665 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 SERINC2Q96SA4 455 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 NDC1Q9BTX1 674 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 DDX23Q9BUQ8 820 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 MS4A7Q9GZW8 240 aaPredicted RBP8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 KIAA1683Q9H0B3 1180 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 PABPC3Q9H361 631 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 SAYSD1Q9NPB0 183 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 LPAR3Q9UBY5 353 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 JAG2Q9Y219 1238 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 TMX2Q9Y320 296 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 CUX1P39880 1505 aa8.47□□□□□ -1.05
GAPVD1-217ENST00000479511 YEATS2Q9ULM3 1422 aa8.46□□□□□ -1.05
GAPVD1-217ENST00000479511 ZNF785A8K8V0 405 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 RAB27BO00194 218 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 FURINP09958 794 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 NPPBP16860 134 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 EGR1P18146 543 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 CCR5P51681 352 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 POU6F2P78424 691 aaPredicted RBP8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 FSTL1Q12841 308 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 DUSP8Q13202 625 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 EFR3AQ14156 821 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 ZNF827Q17R98 1081 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 SLC45A4Q5BKX6 768 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 FAM47AQ5JRC9 791 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 PRSS36Q5K4E3 855 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 CCDC30Q5VVM6 783 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 ARL6IP4Q66PJ3 421 aaKnown RBP8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 TRMT10BQ6PF06 316 aaKnown RBP8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 SCAMP5Q8TAC9 235 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 AFG1LQ8WV93 481 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 IPCEF1Q8WWN9 437 aaPredicted RBP8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 RAPGEF4Q8WZA2 1011 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 KIRREL1Q96J84 757 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 CHCHD6Q9BRQ6 235 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 MRI1Q9BV20 369 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 GPR35Q9HC97 309 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 HEYLQ9NQ87 328 aaPredicted RBP8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 RLIMQ9NVW2 624 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 ANGEL1Q9UNK9 670 aaKnown RBP8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 MTO1Q9Y2Z2 717 aaKnown RBP8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 PLEKHM1Q9Y4G2 1056 aa8.46□□□□□ -1.06
GAPVD1-217ENST00000479511 USP1O94782 785 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 ACTL6BO94805 426 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 PECAM1P16284 738 aaPredicted RBP8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 ACVR2AP27037 513 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 MRE11P49959 708 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 DLGAP5Q15398 846 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 ATP2B3Q16720 1220 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 C4orf50Q6ZRC1 276 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 ZNF365Q70YC5 407 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 UBE3BQ7Z3V4 1068 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 USP37Q86T82 979 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 GATAD2AQ86YP4 633 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 KYQ8NBH2 561 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 NUDT10Q8NFP7 164 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 SLC35B2Q8TB61 432 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 CENPIQ92674 756 aaPredicted RBP8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 GCDHQ92947 438 aaPredicted RBP8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 NUDT11Q96G61 164 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 PLEKHA5Q9HAU0 1116 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 JKAMPQ9P055 326 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 XPR1Q9UBH6 696 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 FAM184BQ9ULE4 1060 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 PCDHA5Q9Y5H7 936 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 CFAP43Q8NDM7 1665 aa8.45□□□□□ -1.06
GAPVD1-217ENST00000479511 CXorf49A8MYA2 514 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 K7ENM7 598 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 ADAMTS4O75173 837 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 GNAI2P04899 355 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 ATP5JP18859 108 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 PAPOLAP51003 745 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 ZNF135P52742 658 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 PTTG1IPP53801 180 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 SETQ01105 290 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 PRKG2Q13237 762 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 TRPC3Q13507 836 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 SLC29A2Q14542 456 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 TARBP2Q15633 366 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 FCRL6Q6DN72 434 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 LDHDQ86WU2 507 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 IRF2BP1Q8IU81 584 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 CCDC28AQ8IWP9 274 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 LINC00482Q8N8I6 264 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 CSGALNACT1Q8TDX6 532 aa8.44□□□□□ -1.06
GAPVD1-217ENST00000479511 THAP4Q8WY91 577 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms