RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 CBWD5Q5RIA9 395 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 PPM1LQ5SGD2 360 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 RARS2Q5T160 578 aaKnown RBP16.17■□□□□ 0.18
SNX13-205ENST00000471744 PTCRAQ6ISU1 281 aaPredicted RBP16.17■□□□□ 0.18
SNX13-205ENST00000471744 SPATA31D4Q6ZUB0 917 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 TTC39CQ8N584 583 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.17■□□□□ 0.18
SNX13-205ENST00000471744 KBTBD7Q8WVZ9 684 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 RTP3Q9BQQ7 232 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 DNAI2Q9GZS0 605 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 NIF3L1Q9GZT8 377 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 CYP3A43Q9HB55 503 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 CDH9Q9ULB4 789 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 NFE2L3Q9Y4A8 694 aa16.17■□□□□ 0.18
SNX13-205ENST00000471744 TCF20Q9UGU0 1960 aaKnown RBP16.17■□□□□ 0.18
SNX13-205ENST00000471744 GRXCR2A6NFK2 248 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 XYLBO75191 536 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 MTIF2P46199 727 aaKnown RBP16.16■□□□□ 0.18
SNX13-205ENST00000471744 MYL5Q02045 173 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 PLD1Q13393 1074 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 CLUL1Q15846 466 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 INTS6LQ5JSJ4 861 aaKnown RBP16.16■□□□□ 0.18
SNX13-205ENST00000471744 TJAP1Q5JTD0 557 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 ATAT1Q5SQI0 421 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 RNF19BQ6ZMZ0 732 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 C11orf57Q6ZUT1 292 aaPredicted RBP16.16■□□□□ 0.18
SNX13-205ENST00000471744 GPR149Q86SP6 731 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 IRF2BP1Q8IU81 584 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 CREBRFQ8IUR6 639 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 OR6B3Q8NGW1 331 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 SLC7A14Q8TBB6 771 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 SPPL2BQ8TCT7 592 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 SUSD6Q92537 303 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 BCO2Q9BYV7 579 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 PRKD2Q9BZL6 878 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 CYP4F11Q9HBI6 524 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 POLIQ9UNA4 740 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 USP15Q9Y4E8 981 aaPredicted RBP16.16■□□□□ 0.18
SNX13-205ENST00000471744 DOCK6Q96HP0 2047 aa16.16■□□□□ 0.18
SNX13-205ENST00000471744 A0A0C4DFX4 3053 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 MYH10P35580 1976 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 CCDC195A0A1B0GUA6 201 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 MTMR11A4FU01 709 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 LRG1P02750 347 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 OR4Q2P0C623 313 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 EEF1GP26641 437 aaKnown RBP16.15■□□□□ 0.18
SNX13-205ENST00000471744 ASPAP45381 313 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 TUFMP49411 452 aaKnown RBP16.15■□□□□ 0.18
SNX13-205ENST00000471744 SMAD2Q15796 467 aaKnown RBP16.15■□□□□ 0.18
SNX13-205ENST00000471744 MAN2A1Q16706 1144 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 SLC39A12Q504Y0 691 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 TMC5Q6UXY8 1006 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 UNC93AQ86WB7 457 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 OSTM1Q86WC4 334 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 C12orf76Q8N812 135 aaPredicted RBP16.15■□□□□ 0.18
SNX13-205ENST00000471744 SEMA4DQ92854 862 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 TNIP3Q96KP6 325 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 TMEM209Q96SK2 561 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 BPIFA3Q9BQP9 254 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 SYT15Q9BQS2 421 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 MRPL45Q9BRJ2 306 aaKnown RBP16.15■□□□□ 0.18
SNX13-205ENST00000471744 PI4K2AQ9BTU6 479 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 DNAJC25Q9H1X3 360 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 SMYD3Q9H7B4 428 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 PCDHB5Q9Y5E4 795 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 INSL5Q9Y5Q6 135 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 PTPRDP23468 1912 aa16.15■□□□□ 0.18
SNX13-205ENST00000471744 GTPBP10A4D1E9 387 aaKnown RBP16.14■□□□□ 0.17
SNX13-205ENST00000471744 A8MXQ7 604 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 KCNJ18B7U540 433 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 RFPL2O75678 378 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 CAVIN2O95810 425 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 TPM2P07951 284 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 TBXAS1P24557 533 aaPredicted RBP16.14■□□□□ 0.17
SNX13-205ENST00000471744 KCNQ1P51787 676 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 YWHAEP62258 255 aaKnown RBP16.14■□□□□ 0.17
SNX13-205ENST00000471744 KCNJ12Q14500 433 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 CBX2Q14781 532 aaPredicted RBP16.14■□□□□ 0.17
SNX13-205ENST00000471744 NFKBIBQ15653 356 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 SPOPLQ6IQ16 392 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 SCARA5Q6ZMJ2 495 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 C4orf50Q6ZRC1 276 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 ELMOD1Q8N336 334 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 ANKRD20A12PQ8NF67 263 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 SMG7Q92540 1137 aaKnown RBP16.14■□□□□ 0.17
SNX13-205ENST00000471744 FUBP3Q96I24 572 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNX13-205ENST00000471744 PGLYRP2Q96PD5 576 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 APOL5Q9BWW9 433 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 PIDD1Q9HB75 910 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 APOBEC3GQ9HC16 384 aaKnown RBP16.14■□□□□ 0.17
SNX13-205ENST00000471744 ABCB6Q9NP58 842 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 PRKAG3Q9UGI9 489 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 DENND4AQ7Z401 1863 aa16.14■□□□□ 0.17
SNX13-205ENST00000471744 REV3LO60673 3130 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 SYCE3A1L190 88 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 SMTNL1A8MU46 457 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 SEC24AO95486 1093 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 PDGFRBP09619 1106 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 BMP1P13497 986 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 ACAT1P24752 427 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms