RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 OR1D2P34982 312 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 PBX1P40424 430 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 NRIP1P48552 1158 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 NDST1P52848 882 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 ARPP19P56211 112 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 PSMC1P62191 440 aaKnown RBP15.8■□□□□ 0.12
COL9A3-209ENST00000469852 GCNT1Q02742 428 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 INCA1Q0VD86 236 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 FILIP1LQ4L180 1135 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 TCEAL5Q5H9L2 206 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 KLHDC7AQ5VTJ3 777 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 IQCEQ6IPM2 695 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 SLC8B1Q6J4K2 584 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 PDE12Q6L8Q7 609 aaKnown RBP15.8■□□□□ 0.12
COL9A3-209ENST00000469852 GPR65Q8IYL9 337 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 PKMYT1Q99640 499 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 SNX25Q9H3E2 840 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 CYP3A43Q9HB55 503 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 CISHQ9NSE2 258 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 FAM207AQ9NSI2 230 aaPredicted RBP15.8■□□□□ 0.12
COL9A3-209ENST00000469852 TMLHEQ9NVH6 421 aa15.8■□□□□ 0.12
COL9A3-209ENST00000469852 ARHGEF37A1IGU5 675 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 WDR27A2RRH5 827 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 A8MXQ7 604 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 H7C4K7 107 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 CLASP2O75122 1294 aaKnown RBP15.79■□□□□ 0.12
COL9A3-209ENST00000469852 CILPO75339 1184 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 VNN2O95498 520 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 CALCAP01258 141 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 PNMA6AP0CW24 399 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-209ENST00000469852 GNL1P36915 607 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-209ENST00000469852 LHX1P48742 406 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 NDUFV1P49821 464 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 PLCB2Q00722 1185 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 ROR1Q01973 937 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 HYAL1Q12794 435 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 ZNF394Q53GI3 561 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 PDXDC1Q6P996 788 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 PALB2Q86YC2 1186 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 VN1R2Q8NFZ6 395 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 SPATA18Q8TC71 538 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 FAXDC2Q96IV6 333 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 GAS2L1Q99501 681 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-209ENST00000469852 NAA15Q9BXJ9 866 aaKnown RBP15.79■□□□□ 0.12
COL9A3-209ENST00000469852 GPR88Q9GZN0 384 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 ELOVL4Q9GZR5 314 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 ZCWPW1Q9H0M4 648 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 NSUN3Q9H649 340 aaKnown RBP15.79■□□□□ 0.12
COL9A3-209ENST00000469852 PLCB1Q9NQ66 1216 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 CRTAC1Q9NQ79 661 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.79■□□□□ 0.12
COL9A3-209ENST00000469852 LMCD1Q9NZU5 365 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 DNAJC12Q9UKB3 198 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 BARX2Q9UMQ3 279 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-209ENST00000469852 SSX2IPQ9Y2D8 614 aa15.79■□□□□ 0.12
COL9A3-209ENST00000469852 MYBPHLA2RUH7 354 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 OR6C75A6NL08 312 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 RNF225M0QZC1 329 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-209ENST00000469852 FAM163BP0C2L3 166 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 SPATA31D3P0C874 917 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 CPB1P15086 417 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 UCHL3P15374 230 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 TBXAS1P24557 533 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-209ENST00000469852 CLCN4P51793 760 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 DUSP6Q16828 381 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 ARHGAP44Q17R89 818 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 SLC39A12Q504Y0 691 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 INTS6LQ5JSJ4 861 aaKnown RBP15.78■□□□□ 0.12
COL9A3-209ENST00000469852 SARM1Q6SZW1 724 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 RNF19BQ6ZMZ0 732 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 SPATA31D4Q6ZUB0 917 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 THEM5Q8N1Q8 247 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 MICALL1Q8N3F8 863 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 PCMTD1Q96MG8 357 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-209ENST00000469852 SYT15Q9BQS2 421 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 ACBD6Q9BR61 282 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 CRISPLD1Q9H336 500 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 IGFLR1Q9H665 355 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 TLE6Q9H808 572 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 GTF3C4Q9UKN8 822 aa15.78■□□□□ 0.12
COL9A3-209ENST00000469852 PTPRDP23468 1912 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 A0A1W2PQC6 194 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 LINC01565O15544 149 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 TGM5O43548 720 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 EPCAMP16422 314 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 KLRC2P26717 231 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 RAD23BP54727 409 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 POLR2FP61218 127 aaKnown RBP15.77■□□□□ 0.12
COL9A3-209ENST00000469852 RAB33AQ14088 237 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 BMS1Q14692 1282 aaKnown RBP15.77■□□□□ 0.12
COL9A3-209ENST00000469852 LLGL2Q6P1M3 1020 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 LILRA6Q6PI73 481 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 ACOT1Q86TX2 421 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 GPIHBP1Q8IV16 184 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 TTC9BQ8N6N2 239 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 SLC4A11Q8NBS3 891 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 FEZF2Q8TBJ5 459 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 SLC22A17Q8WUG5 538 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 PGLYRP2Q96PD5 576 aa15.77■□□□□ 0.12
COL9A3-209ENST00000469852 EMILIN2Q9BXX0 1053 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms