RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 DUSP6Q16828 381 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 SGSM1Q2NKQ1 1148 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 DPCR1Q3MIW9 517 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 SV2CQ496J9 727 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 SEZ6Q53EL9 994 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 SPOUT1Q5T280 376 aaKnown RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 KIAA0319Q5VV43 1072 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 CEP135Q66GS9 1140 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TPGS2Q68CL5 300 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 KRT39Q6A163 491 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 ANKRD40Q6AI12 368 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 KIAA1841Q6NSI8 718 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 SASS6Q6UVJ0 657 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 CD300LGQ6UXG3 332 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 SV2AQ7L0J3 742 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TRAPPC11Q7Z392 1133 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TMEM173Q86WV6 379 aaPredicted RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 FAM114A1Q8IWE2 563 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TRIM59Q8IWR1 403 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 EFCAB13Q8IY85 973 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 FAM186BQ8IYM0 893 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 SMYD4Q8IYR2 804 aaPredicted RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 VPS52Q8N1B4 723 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TMEM86AQ8N2M4 240 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TTC39CQ8N584 583 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 EFHBQ8N7U6 833 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 C1orf127Q8N9H9 656 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 C3orf58Q8NDZ4 430 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 ENOX1Q8TC92 643 aaKnown RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 GDPD5Q8WTR4 605 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 BCL7CQ8WUZ0 217 aaPredicted RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 POF1BQ8WVV4 589 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 NELFBQ8WX92 580 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 ERCC4Q92889 916 aaPredicted RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 SLC35C1Q96A29 364 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 JAKMIP2Q96AA8 810 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 C18orf25Q96B23 403 aaPredicted RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 ANKRD36BP1Q96IX9 119 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 FAM81BQ96LP2 452 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 CEP295NLQ96MC4 621 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 DUSP9Q99956 384 aaKnown RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TCF25Q9BQ70 676 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 BPIFA3Q9BQP9 254 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TTPALQ9BTX7 342 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 VN1R3Q9BXE9 311 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 EMILIN2Q9BXX0 1053 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 GPR62Q9BZJ7 368 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 IMPG2Q9BZV3 1241 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 MTMR12Q9C0I1 747 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 XYLT2Q9H1B5 865 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 IKZF4Q9H2S9 585 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 PRDM12Q9H4Q4 367 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 PCIF1Q9H4Z3 704 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 THAP9Q9H5L6 903 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TMEM8AQ9HCN3 771 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 DPP3Q9NY33 737 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 KLK14Q9P0G3 267 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TMEM63CQ9P1W3 806 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 MTRRQ9UBK8 725 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 TUBGCP4Q9UGJ1 667 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 ARMCX3Q9UH62 379 aaPredicted RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 SIX4Q9UIU6 781 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 COG5Q9UP83 839 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 MAPK8IP1Q9UQF2 711 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 PRG3Q9Y2Y8 225 aaPredicted RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 R3HCC1Q9Y3T6 440 aaKnown RBP3.79□□□□□ -1.8
TRIM59-202ENST00000468542 DAAM1Q9Y4D1 1078 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 GPSM3Q9Y4H4 160 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 NUB1Q9Y5A7 615 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 MTCH2Q9Y6C9 303 aa3.79□□□□□ -1.8
TRIM59-202ENST00000468542 DOCK6Q96HP0 2047 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ANAPC1Q9H1A4 1944 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 PTPRJQ12913 1337 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 GOLGA8IPA6NC78 632 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 OR6C75A6NL08 312 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 GOLGA8JA6NMD2 632 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 TTLL8A6PVC2 850 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 LRRIQ3A6PVS8 624 aaPredicted RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 BIN1O00499 593 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 GABRDO14764 452 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CLIC2O15247 247 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 TEX28O15482 410 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ASS1P00966 412 aaKnown RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 IGHA1P01876 353 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 C4BPAP04003 597 aaKnown RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ITGB3P05106 788 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 DLATP10515 647 aaKnown RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 P4HA1P13674 534 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 RFX1P22670 979 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 DNAJB1P25685 340 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 PCSK1P29120 753 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 POLR2BP30876 1174 aaKnown RBP3.78□□□□□ -1.8
TRIM59-202ENST00000468542 PBX3P40426 434 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 LHX1P48742 406 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 CASP4P49662 377 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 MXI1P50539 228 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 ERVFC1P60507 584 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 MYL5Q02045 173 aa3.78□□□□□ -1.8
TRIM59-202ENST00000468542 PTSQ03393 145 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms