RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 TMEM79Q9BSE2 394 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 QTRT1Q9BXR0 403 aaKnown RBP3□□□□□ -1.93
CCDC93-205ENST00000466171 ADGRE3Q9BY15 652 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 VPS16Q9H269 839 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 SLC45A2Q9UMX9 530 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 TRIM75PA6NK02 468 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 ZNF785A8K8V0 405 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 KCNU1A8MYU2 1149 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 PRRT4C9JH25 899 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 E9PLN8 166 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 K7ESF4 209 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 MYO1FO00160 1098 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 TLR5O60602 858 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 NDUFS2O75306 463 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 DNAJB5O75953 348 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 CLSTN1O94985 981 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 NTN1O95631 604 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 SMARCA1P28370 1054 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 CCKBRP32239 447 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 EEFSECP57772 596 aaKnown RBP2.99□□□□□ -1.93
CCDC93-205ENST00000466171 ERVK-21P61565 698 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 PSMC1P62191 440 aaKnown RBP2.99□□□□□ -1.93
CCDC93-205ENST00000466171 TLE1Q04724 770 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 RAPGEF1Q13905 1077 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 TRIP6Q15654 476 aaKnown RBP2.99□□□□□ -1.93
CCDC93-205ENST00000466171 ZNF260Q3ZCT1 412 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 CCDC93Q567U6 631 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 AWAT2Q6E213 333 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 SFRP4Q6FHJ7 346 aaPredicted RBP2.99□□□□□ -1.93
CCDC93-205ENST00000466171 MIS18BP1Q6P0N0 1132 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 SLC2A7Q6PXP3 512 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 TTC7BQ86TV6 843 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 NOP9Q86U38 636 aaKnown RBP2.99□□□□□ -1.93
CCDC93-205ENST00000466171 KRT73Q86Y46 540 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 ATL2Q8NHH9 583 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 PRSS3P2Q8NHM4 247 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 KLHDC4Q8TBB5 520 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 REPS1Q96D71 796 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 MRGPRX4Q96LA9 322 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 VKORC1Q9BQB6 163 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 SH2D3AQ9BRG2 576 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 PRSS22Q9GZN4 317 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 MKS1Q9NXB0 559 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 DKK3Q9UBP4 350 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 RAD54BQ9Y620 910 aa2.99□□□□□ -1.93
CCDC93-205ENST00000466171 SHROOM4Q9ULL8 1493 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 TISP43B9A030 160 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 SLC16A3O15427 465 aaKnown RBP2.98□□□□□ -1.93
CCDC93-205ENST00000466171 EYA4O95677 639 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 TOP3BO95985 862 aaKnown RBP2.98□□□□□ -1.93
CCDC93-205ENST00000466171 GJB1P08034 283 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 LPOP22079 712 aaPredicted RBP2.98□□□□□ -1.93
CCDC93-205ENST00000466171 NR4A2P43354 598 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 HOXA4Q00056 320 aaPredicted RBP2.98□□□□□ -1.93
CCDC93-205ENST00000466171 HABP2Q14520 560 aaPredicted RBP2.98□□□□□ -1.93
CCDC93-205ENST00000466171 ACAP2Q15057 778 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 PCID2Q5JVF3 399 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 TAF2Q6P1X5 1199 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 PGM2L1Q6PCE3 622 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 CATSPERGQ6ZRH7 1159 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 MRPL10Q7Z7H8 261 aaKnown RBP2.98□□□□□ -1.93
CCDC93-205ENST00000466171 GALNT16Q8N428 558 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 PNLDC1Q8NA58 520 aaKnown RBP2.98□□□□□ -1.93
CCDC93-205ENST00000466171 DDX17Q92841 729 aaKnown RBP2.98□□□□□ -1.93
CCDC93-205ENST00000466171 SMOC2Q9H3U7 446 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 ETAA1Q9NY74 926 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 WWOXQ9NZC7 414 aa2.98□□□□□ -1.93
CCDC93-205ENST00000466171 CFAP20Q9Y6A4 193 aaKnown RBP2.98□□□□□ -1.93
CCDC93-205ENST00000466171 FNDC1Q4ZHG4 1894 aaPredicted RBP2.97□□□□□ -1.93
CCDC93-205ENST00000466171 CYP2D7A0A087X1C5 515 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 SMIM35A0A1B0GVV1 85 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 H0YIZ8 118 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 SOCS2O14508 198 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 HTRA2O43464 458 aaPredicted RBP2.97□□□□□ -1.93
CCDC93-205ENST00000466171 VPS4BO75351 444 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 ARIH2O95376 493 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 GNAI2P04899 355 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 NPSP0C0P6 89 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 JUPP14923 745 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 CYP2C18P33260 490 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 ARHGAP25P42331 645 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 MASP1P48740 699 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 ZNF135P52742 658 aaPredicted RBP2.97□□□□□ -1.93
CCDC93-205ENST00000466171 IL10RAQ13651 578 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 RABEP1Q15276 862 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 CERKLQ49MI3 558 aaPredicted RBP2.97□□□□□ -1.93
CCDC93-205ENST00000466171 RUSC1-AS1Q66K80 236 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 SLC4A10Q6U841 1118 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 DTX2Q86UW9 622 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 ZDHHC17Q8IUH5 632 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 SPATA3Q8NHX4 192 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 PIGOQ8TEQ8 1089 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 COG1Q8WTW3 980 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 ASB2Q96Q27 587 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 SPRTNQ9H040 489 aaPredicted RBP2.97□□□□□ -1.93
CCDC93-205ENST00000466171 GPR35Q9HC97 309 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 SH2B3Q9UQQ2 575 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 MRFAP1Q9Y605 127 aa2.97□□□□□ -1.93
CCDC93-205ENST00000466171 KLHL33A6NCF5 533 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms