RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 TMEM169Q96HH4 297 aa14.27□□□□□ -0.12
ATF3-208ENST00000465155 HEXIM2Q96MH2 286 aaKnown RBP14.27□□□□□ -0.12
ATF3-208ENST00000465155 DPEP3Q9H4B8 488 aa14.27□□□□□ -0.12
ATF3-208ENST00000465155 DEF6Q9H4E7 631 aa14.27□□□□□ -0.12
ATF3-208ENST00000465155 NHEJ1Q9H9Q4 299 aaPredicted RBP14.27□□□□□ -0.12
ATF3-208ENST00000465155 SYN3O14994 580 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 THAP12O43422 761 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 PAEPP09466 180 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 MYOGP15173 224 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 CD19P15391 556 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 FGFR3P22607 806 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 ACAT1P24752 427 aaKnown RBP14.26□□□□□ -0.13
ATF3-208ENST00000465155 BRD2P25440 801 aaKnown RBP14.26□□□□□ -0.13
ATF3-208ENST00000465155 PPM1AP35813 382 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 TAF3Q5VWG9 929 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 ACOT1Q86TX2 421 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 SPATA18Q8TC71 538 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 B3GALT6Q96L58 329 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 NOCTQ9UK39 431 aaKnown RBP14.26□□□□□ -0.13
ATF3-208ENST00000465155 CEP290O15078 2479 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 PLXNA4Q9HCM2 1894 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 SSU72P8A0A1W2PR75 194 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 LINC01553A4QN01 128 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 EFEMP2O95967 443 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 PSMC1P62191 440 aaKnown RBP14.26□□□□□ -0.13
ATF3-208ENST00000465155 MTF1Q14872 753 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.26□□□□□ -0.13
ATF3-208ENST00000465155 TAS1R1Q7RTX1 841 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 THEM5Q8N1Q8 247 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 DDX1Q92499 740 aaKnown RBP14.26□□□□□ -0.13
ATF3-208ENST00000465155 TNIP3Q96KP6 325 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 CCDC42Q96M95 316 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 AGPAT1Q99943 283 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.26□□□□□ -0.13
ATF3-208ENST00000465155 VN1R3Q9BXE9 311 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 DNAI2Q9GZS0 605 aa14.26□□□□□ -0.13
ATF3-208ENST00000465155 SEPT11Q9NVA2 429 aaKnown RBP14.26□□□□□ -0.13
ATF3-208ENST00000465155 ARHGAP6O43182 974 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 ATP2C2O75185 946 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 FGF18O76093 207 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 MMEP08473 750 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 PCSK1P29120 753 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 SSTR3P32745 418 aaPredicted RBP14.25□□□□□ -0.13
ATF3-208ENST00000465155 BMP8BP34820 402 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 RTP2Q5QGT7 225 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 VARS2Q5ST30 1063 aaKnown RBP14.25□□□□□ -0.13
ATF3-208ENST00000465155 RAD9BQ6WBX8 426 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 VPS36Q86VN1 386 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 ZNF677Q86XU0 584 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 GLYCTKQ8IVS8 523 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 RNF168Q8IYW5 571 aaPredicted RBP14.25□□□□□ -0.13
ATF3-208ENST00000465155 CRYBG2Q8N1P7 616 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 C12orf29Q8N999 325 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 B3GALNT2Q8NCR0 500 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 ZNF606Q8WXB4 792 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 TFAP2BQ92481 460 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 LPIN3Q9BQK8 851 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 RTP3Q9BQQ7 232 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 SYT11Q9BT88 431 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 TTPALQ9BTX7 342 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 ADAMTS1Q9UHI8 967 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 PCDHA11Q9Y5I1 949 aa14.25□□□□□ -0.13
ATF3-208ENST00000465155 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.25□□□□□ -0.133e-7■■□□□ 14.1
ATF3-208ENST00000465155 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.24□□□□□ -0.13
ATF3-208ENST00000465155 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.24□□□□□ -0.13
ATF3-208ENST00000465155 AKR1B10O60218 316 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 OAZ2O95190 189 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 CA3P07451 260 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 VDRP11473 427 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 CHRNB2P17787 502 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 TNFAIP3P21580 790 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 CTNNB1P35222 781 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 CYLC1P35663 651 aaPredicted RBP14.24□□□□□ -0.13
ATF3-208ENST00000465155 KIF11P52732 1056 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 FMO1Q01740 532 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 CDR2Q01850 454 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 KRT17Q04695 432 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 USP41Q3LFD5 358 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 SGO2Q562F6 1265 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 KIAA0319Q5VV43 1072 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 DDX53Q86TM3 631 aaKnown RBP14.24□□□□□ -0.13
ATF3-208ENST00000465155 CCDC170Q8IYT3 715 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 KLHL23Q8NBE8 558 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 LNX1Q8TBB1 728 aaPredicted RBP14.24□□□□□ -0.13
ATF3-208ENST00000465155 SYT15Q9BQS2 421 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 ZSWIM1Q9BR11 485 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 ACBD6Q9BR61 282 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 FAM49BQ9NUQ9 324 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 SPTLC3Q9NUV7 552 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 CDH9Q9ULB4 789 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 KIAA1257Q9ULG3 409 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 RWDD3Q9Y3V2 267 aa14.24□□□□□ -0.13
ATF3-208ENST00000465155 MED7O43513 233 aa14.23□□□□□ -0.13
ATF3-208ENST00000465155 ARHGEF15O94989 841 aa14.23□□□□□ -0.13
ATF3-208ENST00000465155 SOD2P04179 222 aa14.23□□□□□ -0.13
ATF3-208ENST00000465155 CFHP08603 1231 aa14.23□□□□□ -0.13
ATF3-208ENST00000465155 PTPN1P18031 435 aaKnown RBP14.23□□□□□ -0.13
ATF3-208ENST00000465155 BMPR1AP36894 532 aa14.23□□□□□ -0.13
ATF3-208ENST00000465155 PBX2P40425 430 aa14.23□□□□□ -0.13
ATF3-208ENST00000465155 PLCB3Q01970 1234 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms