RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 HAPLN1P10915 354 aaPredicted RBP17.46■□□□□ 0.39
SSNA1-204ENST00000464553 VEPH1Q14D04 833 aa17.46■□□□□ 0.39
SSNA1-204ENST00000464553 EDRF1Q3B7T1 1238 aa17.46■□□□□ 0.39
SSNA1-204ENST00000464553 LRRTM3Q86VH5 581 aa17.46■□□□□ 0.39
SSNA1-204ENST00000464553 ADGRF2Q8IZF7 708 aa17.46■□□□□ 0.39
SSNA1-204ENST00000464553 ZNF516Q92618 1163 aa17.46■□□□□ 0.39
SSNA1-204ENST00000464553 SYAP1Q96A49 352 aaPredicted RBP17.46■□□□□ 0.39
SSNA1-204ENST00000464553 E2F7Q96AV8 911 aa17.46■□□□□ 0.39
SSNA1-204ENST00000464553 FUBP3Q96I24 572 aaKnown RBP eCLIP17.46■□□□□ 0.39
SSNA1-204ENST00000464553 CEP295NLQ96MC4 621 aa17.46■□□□□ 0.39
SSNA1-204ENST00000464553 TMEM209Q96SK2 561 aa17.46■□□□□ 0.39
SSNA1-204ENST00000464553 LRRC3Q9BY71 257 aa17.46■□□□□ 0.39
SSNA1-204ENST00000464553 GZF1Q9H116 711 aaPredicted RBP17.46■□□□□ 0.39
SSNA1-204ENST00000464553 TCHHQ07283 1943 aa17.46■□□□□ 0.39
SSNA1-204ENST00000464553 TECTAO75443 2155 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 WARSP23381 471 aaKnown RBP17.45■□□□□ 0.38
SSNA1-204ENST00000464553 CLCN5P51795 746 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 RPL10AP62906 217 aaKnown RBP17.45■□□□□ 0.38
SSNA1-204ENST00000464553 SLC5A9Q2M3M2 681 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 CFAP221Q4G0U5 840 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 INTS6LQ5JSJ4 861 aaKnown RBP17.45■□□□□ 0.38
SSNA1-204ENST00000464553 LMBRD2Q68DH5 695 aaPredicted RBP17.45■□□□□ 0.38
SSNA1-204ENST00000464553 PARM1Q6UWI2 310 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 DNAJB7Q7Z6W7 309 aaPredicted RBP17.45■□□□□ 0.38
SSNA1-204ENST00000464553 RSAD2Q8WXG1 361 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 TAF4BQ92750 862 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 ELSPBP1Q96BH3 223 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 CRISPLD1Q9H336 500 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 TRPV4Q9HBA0 871 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 CHMP5Q9NZZ3 219 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 CDH9Q9ULB4 789 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 SLC27A5Q9Y2P5 690 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 NUMBLQ9Y6R0 609 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 SCN1AP35498 2009 aa17.45■□□□□ 0.38
SSNA1-204ENST00000464553 MYO10Q9HD67 2058 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 PHACTR2O75167 634 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 C4BPAP04003 597 aaKnown RBP17.44■□□□□ 0.38
SSNA1-204ENST00000464553 WEE1P30291 646 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 PSMC2P35998 433 aaKnown RBP17.44■□□□□ 0.38
SSNA1-204ENST00000464553 PPP1R2P41236 205 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 PFKPQ01813 784 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 WDR72Q3MJ13 1102 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 MGAT5BQ3V5L5 792 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 ZNF658Q5TYW1 1059 aaPredicted RBP17.44■□□□□ 0.38
SSNA1-204ENST00000464553 FAM171BQ6P995 826 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 INTS8Q75QN2 995 aaKnown RBP17.44■□□□□ 0.38
SSNA1-204ENST00000464553 FGF14Q92915 247 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 MCRS1Q96EZ8 462 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 PKMYT1Q99640 499 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 MKNK1Q9BUB5 465 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 DNAJC25Q9H1X3 360 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 FBXL21Q9UKT6 434 aa17.44■□□□□ 0.38
SSNA1-204ENST00000464553 MYL4P12829 197 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 NR2F2P24468 414 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 AVPR2P30518 371 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 MAGEA11P43364 429 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 TNNC1P63316 161 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 ADAM9Q13443 819 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 PNOCQ13519 176 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 SGSM1Q2NKQ1 1148 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 ZCWPW2Q504Y3 356 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 C4orf50Q6ZRC1 276 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 TMC8Q8IU68 726 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 HS6ST3Q8IZP7 471 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 KBTBD7Q8WVZ9 684 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 SMARCD2Q92925 531 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 SMARCE1Q969G3 411 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 SHDQ96IW2 340 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 MMS19Q96T76 1030 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 XYLT2Q9H1B5 865 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 IRF2BPLQ9H1B7 796 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 MFSD1Q9H3U5 465 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 ZFP14Q9HCL3 533 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 PCDHA5Q9Y5H7 936 aa17.43■□□□□ 0.38
SSNA1-204ENST00000464553 LRRIQ3A6PVS8 624 aaPredicted RBP17.42■□□□□ 0.38
SSNA1-204ENST00000464553 KINO60870 393 aaKnown RBP17.42■□□□□ 0.38
SSNA1-204ENST00000464553 MOSPD3O75425 235 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 CSH1P0DML2 217 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 CSH2P0DML3 217 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 KRT13P13646 458 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 P4HA1P13674 534 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 CEBPBP17676 345 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 CDC25CP30307 473 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 GTF2H1P32780 548 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 GNL1P36915 607 aaPredicted RBP17.42■□□□□ 0.38
SSNA1-204ENST00000464553 CCR2P41597 374 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 CASP4P49662 377 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 VAMP7P51809 220 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 TAF12Q16514 161 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 ZACNQ401N2 412 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 CEP135Q66GS9 1140 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 SCARA3Q6AZY7 606 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 ASTLQ6HA08 431 aaPredicted RBP17.42■□□□□ 0.38
SSNA1-204ENST00000464553 PHLDB3Q6NSJ2 640 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 PLEKHO2Q8TD55 490 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 ING5Q8WYH8 240 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 TCEAL4Q96EI5 215 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 ASB16Q96NS5 453 aa17.42■□□□□ 0.38
SSNA1-204ENST00000464553 SEPT5Q99719 369 aaPredicted RBP17.42■□□□□ 0.38
SSNA1-204ENST00000464553 SNX25Q9H3E2 840 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms