RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 KINO60870 393 aaKnown RBP9.53□□□□□ -0.88
LDB1-203ENST00000461873 PPP1R37O75864 691 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 CSH1P0DML2 217 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 CSH2P0DML3 217 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 DLATP10515 647 aaKnown RBP9.53□□□□□ -0.88
LDB1-203ENST00000461873 ANXA13P27216 316 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 ADSSP30520 456 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 AFMP43652 599 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 CYP2J2P51589 502 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 TNNC1P63316 161 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 KRT85P78386 507 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 KCNA1Q09470 495 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 BECN1Q14457 450 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 MAPRE1Q15691 268 aaKnown RBP9.53□□□□□ -0.88
LDB1-203ENST00000461873 PRSS36Q5K4E3 855 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 WSCD1Q658N2 575 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 C4orf50Q6ZRC1 276 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 UNC13DQ70J99 1090 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 FRMD5Q7Z6J6 570 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 MFSD6LQ8IWD5 586 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 NELFCDQ8IXH7 590 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 PIP4P2Q8N4L2 257 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 GIPC2Q8TF65 315 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 FAM3CQ92520 227 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 MRPS31Q92665 395 aaKnown RBP9.53□□□□□ -0.88
LDB1-203ENST00000461873 BORCS6Q96GS4 357 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 MSANTD3Q96H12 275 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 HPDLQ96IR7 371 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 SPATA32Q96LK8 384 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 PHOX2BQ99453 314 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 C7orf25Q9BPX7 421 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 ACBD6Q9BR61 282 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 CBWD1Q9BRT8 395 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 MTMR12Q9C0I1 747 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 DNAI2Q9GZS0 605 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 SNX25Q9H3E2 840 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 PDE11AQ9HCR9 933 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 HEBP1Q9NRV9 189 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 EXOC1Q9NV70 894 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 KBTBD4Q9NVX7 518 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 HSPBP1Q9NZL4 362 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 CGNQ9P2M7 1197 aaKnown RBP9.53□□□□□ -0.88
LDB1-203ENST00000461873 NDRG2Q9UN36 371 aaKnown RBP9.53□□□□□ -0.88
LDB1-203ENST00000461873 PVALEFA0A1B0GWK0 134 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 GOLGA6L4A6NEF3 574 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 SPTLC1O15269 473 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 EXOC3O60645 756 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 LMNAP02545 664 aaKnown RBP9.52□□□□□ -0.89
LDB1-203ENST00000461873 GLULP15104 373 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 ANK1P16157 1881 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 CD72P21854 359 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 DDX6P26196 483 aaKnown RBP eCLIP9.52□□□□□ -0.89
LDB1-203ENST00000461873 SCN1AP35498 2009 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 NBL1P41271 181 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 VIPR2P41587 438 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 CASP5P51878 434 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 EPHA5P54756 1037 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 NRLP54845 237 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 PLCB2Q00722 1185 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 LRRC32Q14392 662 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 SNRNP35Q16560 246 aaKnown RBP9.52□□□□□ -0.89
LDB1-203ENST00000461873 ARHGAP29Q52LW3 1261 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 SHC4Q6S5L8 630 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 CRELD2Q6UXH1 353 aaPredicted RBP9.52□□□□□ -0.89
LDB1-203ENST00000461873 DPH6Q7L8W6 267 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 WDR49Q8IV35 697 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 ARID3BQ8IVW6 561 aaPredicted RBP9.52□□□□□ -0.89
LDB1-203ENST00000461873 SCN4BQ8IWT1 228 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 EFCAB13Q8IY85 973 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 ADGRF2Q8IZF7 708 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 TOP6BLQ8N6T0 577 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 XXYLT1Q8NBI6 393 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 TTC16Q8NEE8 873 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 OR10T2Q8NGX3 314 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 SHKBP1Q8TBC3 707 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 SPATA18Q8TC71 538 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 CCDC127Q96BQ5 260 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 IPO9Q96P70 1041 aaKnown RBP9.52□□□□□ -0.89
LDB1-203ENST00000461873 TMEM209Q96SK2 561 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 PI4K2AQ9BTU6 479 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 STRA6Q9BX79 667 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 BLZF1Q9H2G9 400 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 TASP1Q9H6P5 420 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 C8orf33Q9H7E9 229 aaPredicted RBP9.52□□□□□ -0.89
LDB1-203ENST00000461873 ZNF334Q9HCZ1 680 aaPredicted RBP9.52□□□□□ -0.89
LDB1-203ENST00000461873 LTB4R2Q9NPC1 389 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 MAGEC2Q9UBF1 373 aaPredicted RBP9.52□□□□□ -0.89
LDB1-203ENST00000461873 USP25Q9UHP3 1055 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 RAB23Q9ULC3 237 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 PCDHA7Q9UN72 937 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 PIAS3Q9Y6X2 628 aa9.52□□□□□ -0.89
LDB1-203ENST00000461873 ZNF638Q14966 1978 aaKnown RBP9.52□□□□□ -0.89
LDB1-203ENST00000461873 A0A087X0B3 334 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 PROB1E7EW31 1015 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 CLIC2O15247 247 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 CHADO15335 359 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 SOAT2O75908 522 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 HAPLN1P10915 354 aaPredicted RBP9.51□□□□□ -0.89
LDB1-203ENST00000461873 P4HA1P13674 534 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 GRIK1P39086 918 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms