RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 TBX20Q9UMR3 447 aa8.69□□□□□ -1.02
NIF3L1-209ENST00000454952 TIMM13Q9Y5L4 95 aaPredicted RBP8.69□□□□□ -1.02
NIF3L1-209ENST00000454952 DENND4CQ5VZ89 1909 aa8.69□□□□□ -1.02
NIF3L1-209ENST00000454952 A0A0B4J269 797 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 DCDC2BA2VCK2 349 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 VWA3AA6NCI4 1184 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 K7ENM7 598 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 TBCAO75347 108 aaKnown RBP8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 AKAP3O75969 853 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 FAM13AO94988 1023 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 CYP11A1P05108 521 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 KRT18P05783 430 aaKnown RBP8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 ADRB1P08588 477 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 OR4Q2P0C623 313 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 GABRR2P28476 465 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 UBA7P41226 1012 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 LIMK1P53667 647 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 EMP3P54852 163 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 SPAG1Q07617 926 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 GRSF1Q12849 480 aaKnown RBP eCLIP8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 TMEM132DQ14C87 1099 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 ENOX2Q16206 610 aaKnown RBP8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 IL17AQ16552 155 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 LPAL2Q16609 132 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 MGAT5BQ3V5L5 792 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 TMEM119Q4V9L6 283 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 PPM1JQ5JR12 505 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 C9orf57Q5W0N0 161 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 IL31Q6EBC2 164 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 WDR5BQ86VZ2 330 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 NT5DC4Q86YG4 428 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 DCP1BQ8IZD4 617 aaKnown RBP8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 MYCT1Q8N699 235 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 ATAD1Q8NBU5 361 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 RASSF8Q8NHQ8 419 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 SPPL2BQ8TCT7 592 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 CNTNAP3BQ96NU0 1288 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 PNMA5Q96PV4 448 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 SEPT5Q99719 369 aaPredicted RBP8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 CNTNAP3Q9BZ76 1288 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 KIF9Q9HAQ2 790 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 SLC27A5Q9Y2P5 690 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 C2CD2Q9Y426 696 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 TSC2P49815 1807 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 KIF26AQ9ULI4 1882 aaPredicted RBP8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 SCN1AP35498 2009 aa8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 CNOT1A5YKK6 2376 aaKnown RBP8.68□□□□□ -1.02
NIF3L1-209ENST00000454952 EPG5Q9HCE0 2579 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 H3BQV1 296 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 K7ESF4 209 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 PIRO00625 290 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 NRG2O14511 850 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 HRO43593 1189 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 TRAK2O60296 914 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 FAM189A1O60320 539 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 VNN2O95498 520 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 AVPR1AP37288 418 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 PNPLA4P41247 253 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 TNFSF9P41273 254 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 TAF6P49848 677 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 ZNF131P52739 623 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 TSPY1Q01534 308 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 BFSP1Q12934 665 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 CCINQ13939 588 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 PON2Q15165 354 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 NFE2Q16621 373 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 SV2CQ496J9 727 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 SLC39A12Q504Y0 691 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 HEATR6Q6AI08 1181 aaKnown RBP8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 JADE1Q6IE81 842 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 CC2D1AQ6P1N0 951 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 GAREM2Q75VX8 874 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 CACNA2D4Q7Z3S7 1137 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 GPBP1Q86WP2 473 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 C12orf50Q8NA57 414 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 CCDC26Q8TAB7 109 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 HVCN1Q96D96 273 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 RSPRY1Q96DX4 576 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 ZNF560Q96MR9 790 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 TMEM209Q96SK2 561 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 REEP2Q9BRK0 252 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 CCSER1Q9C0I3 900 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 ZCWPW1Q9H0M4 648 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 CRISPLD1Q9H336 500 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 KDM4CQ9H3R0 1056 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 GTSE1Q9NYZ3 720 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 UXTQ9UBK9 157 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 CPSF3Q9UKF6 684 aaKnown RBP8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 SLC8A2Q9UPR5 921 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 PCDHGA5Q9Y5G8 931 aa8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.67□□□□□ -1.02
NIF3L1-209ENST00000454952 FRYLO94915 3013 aa8.66□□□□□ -1.02
NIF3L1-209ENST00000454952 NCANO14594 1321 aa8.66□□□□□ -1.02
NIF3L1-209ENST00000454952 ANO9A1A5B4 782 aa8.66□□□□□ -1.02
NIF3L1-209ENST00000454952 CYB561D2O14569 222 aa8.66□□□□□ -1.02
NIF3L1-209ENST00000454952 RPP40O75818 363 aaKnown RBP8.66□□□□□ -1.02
NIF3L1-209ENST00000454952 IL18RAPO95256 599 aa8.66□□□□□ -1.02
NIF3L1-209ENST00000454952 DRD1P21728 446 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms