RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 ZBTB7AO95365 584 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 GNAI2P04899 355 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 DBHP09172 617 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 ITGB5P18084 799 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 ZEB1P37275 1124 aaPredicted RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 BCAT1P54687 386 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 ANTXR2P58335 489 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 POU6F2P78424 691 aaPredicted RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 IL13RA1P78552 427 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 ATP8B2P98198 1209 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 PLIN5Q00G26 463 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 CHRNEQ04844 493 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 CALD1Q05682 793 aaKnown RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 TARBP2Q15633 366 aaKnown RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 ATP2B3Q16720 1220 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 ZNF827Q17R98 1081 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 MSMPQ1L6U9 139 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 SKIDA1Q1XH10 827 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 C19orf54Q5BKX5 351 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 KANK2Q63ZY3 851 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 ATG16L1Q676U5 607 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 TEPPQ6URK8 271 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 KIAA0408Q6ZU52 694 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 RAB11FIP2Q7L804 512 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 R3HCC1LQ7Z5L2 792 aaKnown RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 KRT73Q86Y46 540 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 FAM126BQ8IXS8 530 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 TEX11Q8IYF3 940 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 TRMT2AQ8IZ69 625 aaKnown RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 NGEFQ8N5V2 710 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 SLC15A4Q8N697 577 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 ATP2A3Q93084 1043 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 HRASLS5Q96KN8 279 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 WDR92Q96MX6 357 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 RBM15Q96T37 977 aaKnown RBP eCLIP4.29□□□□□ -1.72
PMS1-216ENST00000447734 OSBPL1AQ9BXW6 950 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 KRTAP17-1Q9BYP8 105 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 TXLNGYQ9BZA5 131 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 ADAMTS10Q9H324 1103 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 RNPEPQ9H4A4 650 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 ACAD9Q9H845 621 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 SAE1Q9UBE0 346 aaPredicted RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 PI4KBQ9UBF8 816 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 RBPJLQ9UBG7 517 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 ADD3Q9UEY8 706 aaKnown RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 TRPS1Q9UHF7 1281 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 ISY1Q9ULR0 285 aaKnown RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 RUVBL1Q9Y265 456 aaKnown RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 RSF1Q96T23 1441 aaPredicted RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 A0A087WWL8 130 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 F8W031 263 aaPredicted RBP4.28□□□□□ -1.72
PMS1-216ENST00000447734 RAB27BO00194 218 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 SRGAP3O43295 1099 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 ADCY6O43306 1168 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 PTP4A3O75365 173 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 KRT38O76015 456 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 UNC5CO95185 931 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 SGPL1O95470 568 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 SCGB1D1O95968 90 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 CSF1P09603 554 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 GAAP10253 952 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 ACADMP11310 421 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 PECAM1P16284 738 aaPredicted RBP4.28□□□□□ -1.72
PMS1-216ENST00000447734 BTF3P20290 206 aaKnown RBP4.28□□□□□ -1.72
PMS1-216ENST00000447734 ACVR2AP27037 513 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 ABCD3P28288 659 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 PCSK1P29120 753 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 GUCY1A2P33402 732 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 HOXD13P35453 343 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 ARL4AP40617 200 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 SLC11A2P49281 568 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 DLG4P78352 724 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 MXRA7P84157 204 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 CD83Q01151 205 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.28□□□□□ -1.72
PMS1-216ENST00000447734 NSUN2Q08J23 767 aaKnown RBP eCLIP4.28□□□□□ -1.72
PMS1-216ENST00000447734 GALNT2Q10471 571 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 EIF4A2Q14240 407 aaKnown RBP4.28□□□□□ -1.72
PMS1-216ENST00000447734 SLC29A2Q14542 456 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 WTAPQ15007 396 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 ANKRD1Q15327 319 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 TRIM71Q2Q1W2 868 aaKnown RBP4.28□□□□□ -1.72
PMS1-216ENST00000447734 RAP1GAP2Q684P5 730 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 GRAMD4Q6IC98 578 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 TMTC3Q6ZXV5 915 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 TAS1R1Q7RTX1 841 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 PROSER1Q86XN7 944 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 SPPL2CQ8IUH8 684 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 ARMC8Q8IUR7 673 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 CCDC28AQ8IWP9 274 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 UNC5BQ8IZJ1 945 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 PIK3C3Q8NEB9 887 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 FBXO18Q8NFZ0 1043 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 CPT1CQ8TCG5 803 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 CASKIN2Q8WXE0 1202 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 ATRIPQ8WXE1 791 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 C3orf49Q96BT1 292 aa4.28□□□□□ -1.72
PMS1-216ENST00000447734 NSUN4Q96CB9 384 aaKnown RBP4.28□□□□□ -1.72
PMS1-216ENST00000447734 RNF125Q96EQ8 232 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms