RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PPP1R42Q7Z4L9 355 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 ARHGEF19Q8IW93 802 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 TCEAL8Q8IYN2 117 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 CBARPQ8N350 705 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 OR7D4Q8NG98 312 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 TTC8Q8TAM2 541 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 SSH3Q8TE77 659 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 DNAAF4Q8WXU2 420 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 RAPGEF4Q8WZA2 1011 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 NELL1Q92832 810 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 COQ10AQ96MF6 247 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 RPS6KC1Q96S38 1066 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 AGAP2Q99490 1192 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 RHOBTB2Q9BYZ6 727 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 ARNT2Q9HBZ2 717 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 LANCL2Q9NS86 450 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 DBF4Q9UBU7 674 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 STAP2Q9UGK3 403 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 EXOC6BQ9Y2D4 811 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 ATP11BQ9Y2G3 1177 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 HS3ST4Q9Y661 456 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 FPGT-TNNI3KV9GXZ4 949 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 MARF1Q9Y4F3 1742 aaKnown RBP4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 LRRC37A3O60309 1634 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 PXDNLA1KZ92 1463 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 OVOS2A0A0G2JMS6 1433 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 TMEM94Q12767 1356 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 IBTKQ9P2D0 1353 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 AOX1Q06278 1338 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 PI4KAP2A4QPH2 592 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 TMEM200CA6NKL6 621 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 FAM171A2A8MVW0 826 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 ERC2O15083 957 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 AKR1B10O60218 316 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 RFPL1O75677 317 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 SURF6O75683 361 aaKnown RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 PRKD3O94806 890 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 DDX58O95786 925 aaKnown RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 LMNAP02545 664 aaKnown RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 LPLP06858 475 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 HSP90AA1P07900 732 aaKnown RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 HKR1P10072 659 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 MX1P20591 662 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 DDX6P26196 483 aaKnown RBP eCLIP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 PTPN7P35236 360 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 DDIT3P35638 169 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 CLRN1P58418 232 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 RNASE9P60153 205 aaKnown RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 SP140Q13342 867 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 TRIM25Q14258 630 aaKnown RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 BMT2Q1RMZ1 405 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 INAVAQ3KP66 663 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 HSP90AB4PQ58FF6 505 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 CT83Q5H943 113 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 FAM47AQ5JRC9 791 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 ATXN7L2Q5T6C5 722 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 HECTD2Q5U5R9 776 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 ABHD17BQ5VST6 288 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 MBNL2Q5VZF2 373 aaKnown RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 KSR2Q6VAB6 950 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 ZBTB46Q86UZ6 589 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 SLC41A1Q8IVJ1 513 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 MAGEB6Q8N7X4 407 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 PI4KAP1Q8N8J0 262 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 CLRN3Q8NCR9 226 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 GPR156Q8NFN8 814 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 MDM1Q8TC05 714 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 EAF2Q96CJ1 260 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 ADI1Q9BV57 179 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 MLST8Q9BVC4 326 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 ACE2Q9BYF1 805 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 GREM2Q9H772 168 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 CHST12Q9NRB3 414 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 AASDHPPTQ9NRN7 309 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 TOPORSQ9NS56 1045 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 RBM12Q9NTZ6 932 aaKnown RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 HYPKQ9NX55 129 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 DPP7Q9UHL4 492 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 NOX1Q9Y5S8 564 aa4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 MED1Q15648 1581 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P11-201ENST00000440127 DCCP43146 1447 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 HEG1Q9ULI3 1381 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 NPHP3Q7Z494 1330 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 SALL3Q9BXA9 1300 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 GOLGA8AA7E2F4 631 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 FZD9O00144 591 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 NUDT3O95989 172 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 ANXA1P04083 346 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 NBPF7P0C2Y1 421 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 ALAS1P13196 640 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 PHKG2P15735 406 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 ZSCAN20P17040 1043 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 PTMSP20962 102 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 BMP5P22003 454 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 TGM1P22735 817 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 MCCP23508 829 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 ERVK-21P61565 698 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 BIRC2Q13490 618 aa4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 HLTFQ14527 1009 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB3P11-201ENST00000440127 ABCB5Q2M3G0 1257 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms