RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 PPP1R2P9O14990 202 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 DDX3YO15523 660 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 COBLO75128 1261 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 TGM6O95932 706 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ANXA1P04083 346 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 FAM153BP0C7A2 387 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 STIP1P31948 543 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 CCT2P78371 535 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 MIIPQ5JXC2 388 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 RASSF3Q86WH2 238 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 SUN5Q8TC36 379 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ATG4AQ8WYN0 398 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ERP44Q9BS26 406 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 TBCDQ9BTW9 1192 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 DCLRE1BQ9H816 532 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 TRPV5Q9NQA5 729 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 CMTM6Q9NX76 183 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 MTMR4Q9NYA4 1195 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 LRFN2Q9ULH4 789 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 GRIP1Q9Y3R0 1128 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ZMYM3Q14202 1370 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 KCNK1O00180 336 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 LDHAP00338 332 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 NR4A1P22736 598 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 TGM3Q08188 693 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 KRT25Q7Z3Z0 450 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 VN1R5Q7Z5H4 357 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 SLC9B2Q86UD5 537 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 GPBP1Q86WP2 473 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 GIMAP8Q8ND71 665 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 TFB1MQ8WVM0 346 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 PIGKQ92643 395 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 CDRT15Q96T59 188 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 APOL5Q9BWW9 433 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 DYRK1BQ9Y463 629 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 USP16Q9Y5T5 823 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 NPIPA5A0A0B4J1W7 369 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 SFI1A8K8P3 1242 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 MYO1FO00160 1098 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 MED24O75448 989 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 STAU1O95793 577 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 MTA1Q13330 715 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 GRB14Q14449 540 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 SQLEQ14534 574 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 FAM83HQ6ZRV2 1179 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 AOPEPQ8N6M6 819 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 OR51D1Q8NGF3 324 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 TSR2Q969E8 191 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 DCUN1D1Q96GG9 259 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 CCDC74BQ96LY2 380 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 PPP1R2P1Q96PQ5 205 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 APOL2Q9BQE5 337 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 TNKS2Q9H2K2 1166 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 DDX18Q9NVP1 670 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 SAR1BQ9Y6B6 198 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 NDUFA10O95299 355 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 MYBL2P10244 700 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 MSX2P35548 267 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 IL2P60568 153 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 CREB5Q02930 508 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 C1QBPQ07021 282 aaKnown RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 SPOCK1Q08629 439 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 GNA13Q14344 377 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 STAT4Q14765 748 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 RABGAP1LQ5R372 815 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 ITPRIPL1Q6GPH6 555 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 PSMC3IPQ9P2W1 217 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-202ENST00000411767 PADI4Q9UM07 663 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 SNX14Q9Y5W7 946 aa4.77□□□□□ -1.65
PTPN13-202ENST00000411767 C2orf78A6NCI8 922 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 OR5H15A6NDH6 313 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 OR5H14A6NHG9 310 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 OR5H1A6NKK0 313 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 M0R2C6 588 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CRTAPO75718 401 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 C6orf222P0C671 652 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 ADD1P35611 737 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 C8orf34Q49A92 452 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 EXOSC6Q5RKV6 272 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 EIF5AL1Q6IS14 154 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 LHFPL3Q86UP9 236 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 TMEM104Q8NE00 496 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 AP3S1Q92572 193 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 DNAJC1Q96KC8 554 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 HIPK3Q9H422 1215 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 ABCB9Q9NP78 766 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CABP1Q9NZU7 370 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CRNNQ9UBG3 495 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 MAD2L2Q9UI95 211 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 AURKCQ9UQB9 309 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 GSTK1Q9Y2Q3 226 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 TMEM120BA0PK00 339 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 TRIM49BA6NDI0 452 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 TRIM49D1C9J1S8 452 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 RBP3P10745 1247 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 MYL4P12829 197 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 MAGEA3P43357 314 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 RAB5CP51148 216 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 TNFAIP8L3Q5GJ75 292 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SAMD4BQ5PRF9 694 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms