RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 WHAMMQ8TF30 809 aa23.43■■□□□ 1.34
EPCAM-202ENST00000405271 ZNF558Q96NG5 402 aa23.43■■□□□ 1.34
EPCAM-202ENST00000405271 NT5C1AQ9BXI3 368 aa23.43■■□□□ 1.34
EPCAM-202ENST00000405271 SNX25Q9H3E2 840 aa23.43■■□□□ 1.34
EPCAM-202ENST00000405271 CERS4Q9HA82 394 aa23.43■■□□□ 1.34
EPCAM-202ENST00000405271 F8W810 466 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 CYP11B1P15538 503 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 GNA15P30679 374 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 LHX1P48742 406 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 NDST1P52848 882 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 ADGRE1Q14246 886 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 WSCD1Q658N2 575 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 SLC47A2Q86VL8 602 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 METTL23Q86XA0 190 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 OR6B3Q8NGW1 331 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 DEF6Q9H4E7 631 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 NHEJ1Q9H9Q4 299 aaPredicted RBP23.42■■□□□ 1.34
EPCAM-202ENST00000405271 AAASQ9NRG9 546 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 HMGXB4Q9UGU5 601 aa23.42■■□□□ 1.34
EPCAM-202ENST00000405271 NOCTQ9UK39 431 aaKnown RBP23.42■■□□□ 1.34
EPCAM-202ENST00000405271 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.42■■□□□ 1.34
EPCAM-202ENST00000405271 SOWAHDA6NJG2 315 aa23.41■■□□□ 1.34
EPCAM-202ENST00000405271 GABRDO14764 452 aa23.41■■□□□ 1.34
EPCAM-202ENST00000405271 SYN3O14994 580 aa23.41■■□□□ 1.34
EPCAM-202ENST00000405271 PLEKP08567 350 aaPredicted RBP23.41■■□□□ 1.34
EPCAM-202ENST00000405271 CYLC1P35663 651 aaPredicted RBP23.41■■□□□ 1.34
EPCAM-202ENST00000405271 RAD23BP54727 409 aa23.41■■□□□ 1.34
EPCAM-202ENST00000405271 FUT10Q6P4F1 479 aa23.41■■□□□ 1.34
EPCAM-202ENST00000405271 KCNT2Q6UVM3 1135 aa23.41■■□□□ 1.34
EPCAM-202ENST00000405271 SPRED2Q7Z698 418 aa23.41■■□□□ 1.34
EPCAM-202ENST00000405271 FIBCD1Q8N539 461 aa23.41■■□□□ 1.34
EPCAM-202ENST00000405271 COLGALT1Q8NBJ5 622 aa23.41■■□□□ 1.34
EPCAM-202ENST00000405271 TMEM176AQ96HP8 235 aa23.41■■□□□ 1.34
EPCAM-202ENST00000405271 ZNF830Q96NB3 372 aaPredicted RBP23.41■■□□□ 1.34
EPCAM-202ENST00000405271 GAS2L1Q99501 681 aaPredicted RBP23.41■■□□□ 1.34
EPCAM-202ENST00000405271 ELOVL4Q9GZR5 314 aa23.41■■□□□ 1.34
EPCAM-202ENST00000405271 TRANK1O15050 2925 aa23.4■■□□□ 1.34
EPCAM-202ENST00000405271 I3L4J1 428 aa23.4■■□□□ 1.34
EPCAM-202ENST00000405271 PPM1AP35813 382 aa23.4■■□□□ 1.34
EPCAM-202ENST00000405271 EIF4A3P38919 411 aaKnown RBP23.4■■□□□ 1.34
EPCAM-202ENST00000405271 ZNF394Q53GI3 561 aa23.4■■□□□ 1.34
EPCAM-202ENST00000405271 SLC4A11Q8NBS3 891 aa23.4■■□□□ 1.34
EPCAM-202ENST00000405271 MAFAQ8NHW3 353 aaPredicted RBP23.4■■□□□ 1.34
EPCAM-202ENST00000405271 CCDC42Q96M95 316 aa23.4■■□□□ 1.34
EPCAM-202ENST00000405271 TWNKQ96RR1 684 aa23.4■■□□□ 1.34
EPCAM-202ENST00000405271 SYT11Q9BT88 431 aa23.4■■□□□ 1.34
EPCAM-202ENST00000405271 A8MXQ7 604 aa23.39■■□□□ 1.34
EPCAM-202ENST00000405271 GNL1P36915 607 aaPredicted RBP23.39■■□□□ 1.34
EPCAM-202ENST00000405271 CDR2Q01850 454 aa23.39■■□□□ 1.34
EPCAM-202ENST00000405271 BMS1Q14692 1282 aaKnown RBP23.39■■□□□ 1.34
EPCAM-202ENST00000405271 ZNF571Q7Z3V5 609 aaPredicted RBP23.39■■□□□ 1.34
EPCAM-202ENST00000405271 NOP9Q86U38 636 aaKnown RBP23.39■■□□□ 1.34
EPCAM-202ENST00000405271 OSTM1Q86WC4 334 aa23.39■■□□□ 1.34
EPCAM-202ENST00000405271 SLC39A11Q8N1S5 342 aa23.39■■□□□ 1.34
EPCAM-202ENST00000405271 ARNTL2Q8WYA1 636 aa23.39■■□□□ 1.34
EPCAM-202ENST00000405271 IGSF21Q96ID5 467 aa23.39■■□□□ 1.34
EPCAM-202ENST00000405271 TNIP3Q96KP6 325 aa23.39■■□□□ 1.34
EPCAM-202ENST00000405271 AGPAT1Q99943 283 aa23.39■■□□□ 1.34
EPCAM-202ENST00000405271 KIAA1257Q9ULG3 409 aa23.39■■□□□ 1.34
EPCAM-202ENST00000405271 EPOPA6NHQ4 379 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 NT5C1B-RDH14C9J2C7 533 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 PBX3P40426 434 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 KIF11P52732 1056 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 ASTE1Q2TB18 679 aaPredicted RBP23.38■■□□□ 1.33
EPCAM-202ENST00000405271 RAD9BQ6WBX8 426 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.38■■□□□ 1.33
EPCAM-202ENST00000405271 DDX1Q92499 740 aaKnown RBP23.38■■□□□ 1.33
EPCAM-202ENST00000405271 CLP1Q92989 425 aaKnown RBP23.38■■□□□ 1.33
EPCAM-202ENST00000405271 DDX43Q9NXZ2 648 aaKnown RBP23.38■■□□□ 1.33
EPCAM-202ENST00000405271 NME7Q9Y5B8 376 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 LINC01553A4QN01 128 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 RFXAPO00287 272 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 THAP12O43422 761 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 MED7O43513 233 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 AKR1B10O60218 316 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 VDRP11473 427 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 PCSK1P29120 753 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 YWHAHQ04917 246 aaPredicted RBP23.38■■□□□ 1.33
EPCAM-202ENST00000405271 OVOS1Q6IE37 1185 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 TMEM173Q86WV6 379 aaPredicted RBP23.38■■□□□ 1.33
EPCAM-202ENST00000405271 SLC20A1Q8WUM9 679 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 TMEM169Q96HH4 297 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 ACP6Q9NPH0 428 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 RWDD3Q9Y3V2 267 aa23.38■■□□□ 1.33
EPCAM-202ENST00000405271 TIMM13Q9Y5L4 95 aaPredicted RBP23.38■■□□□ 1.33
EPCAM-202ENST00000405271 NDUFA10O95299 355 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 EFEMP2O95967 443 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 CD19P15391 556 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 TNFAIP3P21580 790 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 FGFR3P22607 806 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 IGFBP4P22692 258 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 STILQ15468 1287 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 SLC18A3Q16572 532 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 RNF168Q8IYW5 571 aaPredicted RBP23.37■■□□□ 1.33
EPCAM-202ENST00000405271 CRYBG2Q8N1P7 616 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 THEM5Q8N1Q8 247 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 BCL7CQ8WUZ0 217 aaPredicted RBP23.37■■□□□ 1.33
EPCAM-202ENST00000405271 ZNF606Q8WXB4 792 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 GPR62Q9BZJ7 368 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 SPG21Q9NZD8 308 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms