RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 LRRC38Q5VT99 294 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 SPOCD1Q6ZMY3 1216 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 ROPN1BQ9BZX4 212 aaPredicted RBP17.51■□□□□ 0.39
TRIM39-205ENST00000396551 ROPN1Q9HAT0 212 aaPredicted RBP17.51■□□□□ 0.39
TRIM39-205ENST00000396551 ERAP1Q9NZ08 941 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 DNPEPQ9ULA0 475 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 PLXNB2O15031 1838 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 LACTBL1A8MY62 500 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 ASAP2O43150 1006 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 TTC4O95801 387 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 ORC1Q13415 861 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 IZUMO3Q5VZ72 239 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 MAMDC4Q6UXC1 1216 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 ZNF365Q70YC5 407 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 SPATS2Q86XZ4 545 aaKnown RBP17.51■□□□□ 0.39
TRIM39-205ENST00000396551 CXorf38Q8TB03 319 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 NFKBIZQ9BYH8 718 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 NINJ2Q9NZG7 142 aa17.51■□□□□ 0.39
TRIM39-205ENST00000396551 DDX20Q9UHI6 824 aaKnown RBP17.51■□□□□ 0.39
TRIM39-205ENST00000396551 IL18RAPO95256 599 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 ATF7P17544 494 aaPredicted RBP17.5■□□□□ 0.39
TRIM39-205ENST00000396551 RAD23BP54727 409 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 CCDC38Q502W7 563 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 TAPT1Q6NXT6 567 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 C6orf89Q6UWU4 347 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 LINC01465Q8N7H1 131 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 NIPA2Q8N8Q9 360 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 TWNKQ96RR1 684 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 FHDC1Q9C0D6 1143 aaPredicted RBP17.5■□□□□ 0.39
TRIM39-205ENST00000396551 HMGXB4Q9UGU5 601 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 A0A087WZ62 844 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 LGALS2P05162 132 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 STAG3L1P0CL83 205 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 CHRM1P11229 460 aaPredicted RBP17.5■□□□□ 0.39
TRIM39-205ENST00000396551 DRD4P21917 467 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 LACTBP83111 547 aaPredicted RBP17.5■□□□□ 0.39
TRIM39-205ENST00000396551 JADE1Q6IE81 842 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 TADA2BQ86TJ2 420 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 CCDC89Q8N998 374 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 JOSD2Q8TAC2 188 aa17.5■□□□□ 0.39
TRIM39-205ENST00000396551 FDXACB1Q9BRP7 624 aaPredicted RBP17.5■□□□□ 0.39
TRIM39-205ENST00000396551 ASB14A6NK59 587 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 CD19P15391 556 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 PIGHQ14442 188 aaPredicted RBP17.49■□□□□ 0.39
TRIM39-205ENST00000396551 WDR72Q3MJ13 1102 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 ZFYVE27Q5T4F4 411 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 EXOC3L1Q86VI1 746 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 SHCBP1Q8NEM2 672 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 SMYD3Q9H7B4 428 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 PRMT7Q9NVM4 692 aaPredicted RBP17.49■□□□□ 0.39
TRIM39-205ENST00000396551 hCG_1818297A0A087WSY0 165 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 GOLGA8SH3BPF8 625 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 RFC1P35251 1148 aaPredicted RBP17.49■□□□□ 0.39
TRIM39-205ENST00000396551 LIG3P49916 1009 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 TAP1Q03518 808 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 FAM187BQ17R55 369 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 ZNF667Q5HYK9 610 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 HIBCHQ6NVY1 386 aaPredicted RBP17.49■□□□□ 0.39
TRIM39-205ENST00000396551 ARFGAP1Q8N6T3 406 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 CPB2Q96IY4 423 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 PDZD7Q9H5P4 517 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 GGA2Q9UJY4 613 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 ITGB3P05106 788 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 CETN2P41208 172 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 YWHAEP62258 255 aaKnown RBP17.49■□□□□ 0.39
TRIM39-205ENST00000396551 ZNF484Q5JVG2 852 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 LHX5Q9H2C1 402 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 CTNNAL1Q9UBT7 734 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 CEP83Q9Y592 693 aa17.49■□□□□ 0.39
TRIM39-205ENST00000396551 LOC102724159A0A0B4J2E5 919 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 ZSCAN5DPP0CG00 497 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 CDKN2BP42772 138 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 PHKA2P46019 1235 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 CDR1P51861 262 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 PWP2Q15269 919 aaKnown RBP17.48■□□□□ 0.39
TRIM39-205ENST00000396551 P3H1Q32P28 736 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 C9orf131Q5VYM1 1079 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 DRICH1Q6PGQ1 229 aaPredicted RBP17.48■□□□□ 0.39
TRIM39-205ENST00000396551 GSTA5Q7RTV2 222 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 SLC4A11Q8NBS3 891 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 ZNF317Q96PQ6 595 aaPredicted RBP17.48■□□□□ 0.39
TRIM39-205ENST00000396551 C3orf70A6NLC5 250 aaPredicted RBP17.48■□□□□ 0.39
TRIM39-205ENST00000396551 TJP3O95049 919 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 ETS1P14921 441 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 PTPN7P35236 360 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 ZNF792Q3KQV3 632 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 MICALCLQ6ZW33 695 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 KIAA0319LQ8IZA0 1049 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 CPXM1Q96SM3 734 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 ELOVL4Q9GZR5 314 aa17.48■□□□□ 0.39
TRIM39-205ENST00000396551 VTNP04004 478 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 COPS2P61201 443 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 IFT88Q13099 833 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 IFNLR1Q8IU57 520 aaPredicted RBP17.47■□□□□ 0.39
TRIM39-205ENST00000396551 PPM1EQ8WY54 764 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 HAUS1Q96CS2 278 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 CHMP6Q96FZ7 201 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 SEC16BQ96JE7 1060 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 SERPINB12Q96P63 405 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 LRRD1A4D1F6 860 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms