RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ERVK-9P63128 1117 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 OVGP1Q12889 678 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 PLD3Q8IV08 490 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 RAET1EQ8TD07 263 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 RMDN2Q96LZ7 410 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 SIKE1Q9BRV8 207 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 FAM8A1Q9UBU6 413 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 INPP5FQ9Y2H2 1132 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 HNRNPRO43390 633 aaKnown RBP20.57■□□□□ 0.88
SHANK1-203ENST00000391813 TMPRSS6Q8IU80 811 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 TSEN2Q8NCE0 465 aaKnown RBP20.57■□□□□ 0.88
SHANK1-203ENST00000391813 DAGLBQ8NCG7 672 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 AGR3Q8TD06 166 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 PPME1Q9Y570 386 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 ST3GAL1Q11201 340 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 FAM102AQ5T9C2 384 aaPredicted RBP20.57■□□□□ 0.88
SHANK1-203ENST00000391813 NMD3Q96D46 503 aaKnown RBP20.57■□□□□ 0.88
SHANK1-203ENST00000391813 SAR1AQ9NR31 198 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 BTBD7Q9P203 1132 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 TAGLN3Q9UI15 199 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 LRRC6Q86X45 466 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 STAP1Q9ULZ2 295 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 SNRPFP62306 86 aaKnown RBP20.57■□□□□ 0.88
SHANK1-203ENST00000391813 ZNF543Q08ER8 600 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 TTMPQ5BVD1 217 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 THAP2Q9H0W7 228 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 HSPBP1Q9NZL4 362 aa20.57■□□□□ 0.88
SHANK1-203ENST00000391813 TM9SF1O15321 606 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 FAM153BP0C7A2 387 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 OSTNP61366 133 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 MAPK6Q16659 721 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 Q3C1V9 767 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 FAM153CQ494X1 144 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 AASDHQ4L235 1098 aaPredicted RBP20.56■□□□□ 0.88
SHANK1-203ENST00000391813 SAMD7Q7Z3H4 446 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 CNBD2Q96M20 576 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 SEMA4AQ9H3S1 761 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 FAM153AQ9UHL3 310 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 CPSF3Q9UKF6 684 aaKnown RBP20.56■□□□□ 0.88
SHANK1-203ENST00000391813 CORO1CQ9ULV4 474 aaPredicted RBP20.56■□□□□ 0.88
SHANK1-203ENST00000391813 NDUFB10O96000 172 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 PSMC5P62195 406 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 CYGBQ8WWM9 190 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 FAM111AQ96PZ2 611 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 A1CFQ9NQ94 594 aaKnown RBP20.56■□□□□ 0.88
SHANK1-203ENST00000391813 ZNF212Q9UDV6 495 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 KCNN4O15554 427 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 SPRP35270 261 aaPredicted RBP20.56■□□□□ 0.88
SHANK1-203ENST00000391813 EFHC1Q5JVL4 640 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 ZDHHC15Q96MV8 337 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 FSD1LQ9BXM9 530 aa20.56■□□□□ 0.88
SHANK1-203ENST00000391813 NPHP3-ACAD11A0A0J9YXS1 232 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 TBC1D4O60343 1298 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 SNX2O60749 519 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 SRP72O76094 671 aaKnown RBP20.55■□□□□ 0.88
SHANK1-203ENST00000391813 CELF2O95319 508 aaKnown RBP20.55■□□□□ 0.88
SHANK1-203ENST00000391813 THRAP10827 490 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 THNSL1Q8IYQ7 743 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 CASP10Q92851 521 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 ZFRQ96KR1 1074 aaKnown RBP20.55■□□□□ 0.88
SHANK1-203ENST00000391813 FRMD8P1Q9BZ68 369 aaPredicted RBP20.55■□□□□ 0.88
SHANK1-203ENST00000391813 KIF17Q9P2E2 1029 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 POLLQ9UGP5 575 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 UBR1Q8IWV7 1749 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 TRIM49D1C9J1S8 452 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 MYL2P10916 166 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 RALAP11233 206 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 STX5Q13190 355 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 C1orf228Q6PIY5 440 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 BTBD10Q9BSF8 475 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 CDYLQ9Y232 598 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 AK9Q5TCS8 1911 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 NEMP1O14524 444 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 RASA2Q15283 850 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 ZNF662Q6ZS27 426 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 CATSPER4Q7RTX7 472 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 AGAP11Q8TF27 550 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 MMADHCQ9H3L0 296 aaPredicted RBP20.55■□□□□ 0.88
SHANK1-203ENST00000391813 EPB41L4AQ9HCS5 686 aaPredicted RBP20.55■□□□□ 0.88
SHANK1-203ENST00000391813 M0QYV0 167 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 RIPK2O43353 540 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 KIAA1841Q6NSI8 718 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 LRRC74BQ6ZQY2 392 aa20.55■□□□□ 0.88
SHANK1-203ENST00000391813 RBAKQ9NYW8 714 aaPredicted RBP20.55■□□□□ 0.88
SHANK1-203ENST00000391813 CCL15-CCL14A0A0B4J2E2 113 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 GZMAP12544 262 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 CCL15Q16663 113 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 CLEC4FQ8N1N0 589 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 ZSCAN5CA6NGD5 496 aaPredicted RBP20.54■□□□□ 0.88
SHANK1-203ENST00000391813 RBP3P10745 1247 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 PON1P27169 355 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 HOXA10P31260 410 aaPredicted RBP20.54■□□□□ 0.88
SHANK1-203ENST00000391813 EPHX2P34913 555 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 CCDC15Q0P6D6 951 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 TROAPQ12815 778 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 ATP4AP20648 1035 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 ITGB3BPQ13352 177 aaPredicted RBP20.54■□□□□ 0.88
SHANK1-203ENST00000391813 ZNF184Q99676 751 aaPredicted RBP20.54■□□□□ 0.88
SHANK1-203ENST00000391813 PACSIN1Q9BY11 444 aa20.54■□□□□ 0.88
SHANK1-203ENST00000391813 UNC45AQ9H3U1 944 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms