RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 KIF4AO95239 1232 aa13.03□□□□□ -0.32
CAPN9-203ENST00000366666 NDST1P52848 882 aa13.03□□□□□ -0.32
CAPN9-203ENST00000366666 RAD23BP54727 409 aa13.03□□□□□ -0.32
CAPN9-203ENST00000366666 WDR5P61964 334 aaKnown RBP13.03□□□□□ -0.32
CAPN9-203ENST00000366666 CCDC142Q17RM4 750 aa13.03□□□□□ -0.32
CAPN9-203ENST00000366666 TIGD5Q53EQ6 642 aa13.03□□□□□ -0.32
CAPN9-203ENST00000366666 RPUSD2Q8IZ73 545 aaKnown RBP13.03□□□□□ -0.32
CAPN9-203ENST00000366666 MSANTD4Q8NCY6 345 aa13.03□□□□□ -0.32
CAPN9-203ENST00000366666 SLC30A5Q8TAD4 765 aa13.03□□□□□ -0.32
CAPN9-203ENST00000366666 JAKMIP2Q96AA8 810 aa13.03□□□□□ -0.32
CAPN9-203ENST00000366666 PACSIN1Q9BY11 444 aa13.03□□□□□ -0.32
CAPN9-203ENST00000366666 NRDE2Q9H7Z3 1164 aa13.03□□□□□ -0.32
CAPN9-203ENST00000366666 CCDC85CA6NKD9 419 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 TBKBP1A7MCY6 615 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 CILPO75339 1184 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 ERLIN1O75477 346 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 BRD2P25440 801 aaKnown RBP13.02□□□□□ -0.33
CAPN9-203ENST00000366666 LMO2P25791 158 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 FMO1Q01740 532 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 RNASELQ05823 741 aaKnown RBP13.02□□□□□ -0.33
CAPN9-203ENST00000366666 ZNF365Q70YC5 407 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 NPAS4Q8IUM7 802 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 CCDC170Q8IYT3 715 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 ABI1Q8IZP0 508 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 SLC4A11Q8NBS3 891 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 AGPAT1Q99943 283 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 DPEP3Q9H4B8 488 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 IL23AQ9NPF7 189 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 GDAP2Q9NXN4 497 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 CXXC1Q9P0U4 656 aaPredicted RBP13.02□□□□□ -0.33
CAPN9-203ENST00000366666 CDH23Q9H251 3354 aa13.02□□□□□ -0.33
CAPN9-203ENST00000366666 TMCO5BA8MYB1 307 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 EIF3CLB5ME19 914 aaKnown RBP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 NT5C1B-RDH14C9J2C7 533 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 TNNT3P45378 269 aaPredicted RBP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 PSEN1P49768 467 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 SLC18A3Q16572 532 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 SV2CQ496J9 727 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 WSCD1Q658N2 575 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 HDXQ7Z353 690 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 OSTM1Q86WC4 334 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 C12orf29Q8N999 325 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 URGCPQ8TCY9 931 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 TOP1MTQ969P6 601 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 SENP8Q96LD8 212 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 FAM81BQ96LP2 452 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 ZNF560Q96MR9 790 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 EIF3CQ99613 913 aaKnown RBP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 LACRTQ9GZZ8 138 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 SEPT11Q9NVA2 429 aaKnown RBP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 MYO1AQ9UBC5 1043 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 PRKAG2Q9UGJ0 569 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 PUF60Q9UHX1 559 aaKnown RBP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 NENFQ9UMX5 172 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 PRG3Q9Y2Y8 225 aaPredicted RBP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 BZW2Q9Y6E2 419 aaKnown RBP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 DUSP10Q9Y6W6 482 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 TNRC18O15417 2968 aaPredicted RBP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 ABHD14A-ACY1A0A1B0GW23 586 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 CYB561D2O14569 222 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 CLGNO14967 610 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 DGKIO75912 1065 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 LCA5LO95447 670 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 GNA15P30679 374 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 CYLC1P35663 651 aaPredicted RBP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 PNPLA4P41247 253 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 OR1G1P47890 313 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 PDE6CP51160 858 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 INCA1Q0VD86 236 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 LIMS2Q7Z4I7 341 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 TMEM173Q86WV6 379 aaPredicted RBP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 PASD1Q8IV76 773 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 CWC15Q9P013 229 aaKnown RBP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 RSPH14Q9UHP6 348 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 NAGPAQ9UK23 515 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 BARX2Q9UMQ3 279 aaPredicted RBP13.01□□□□□ -0.33
CAPN9-203ENST00000366666 KIAA1671Q9BY89 1806 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 CHD7Q9P2D1 2997 aa13.01□□□□□ -0.33
CAPN9-203ENST00000366666 MYH10P35580 1976 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 CTAGE9A4FU28 777 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 PDGFRBP09619 1106 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 P4HA1P13674 534 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 RPL9P32969 192 aaKnown RBP13□□□□□ -0.33
CAPN9-203ENST00000366666 AARSP49588 968 aaKnown RBP eCLIP13□□□□□ -0.33
CAPN9-203ENST00000366666 BCAR1P56945 870 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 FPGSQ05932 587 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 OR6B3Q8NGW1 331 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 ZNF606Q8WXB4 792 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
CAPN9-203ENST00000366666 CYP3A43Q9HB55 503 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 LZTFL1Q9NQ48 299 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 THAP12O43422 761 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 ATP2C2O75185 946 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 TNFAIP3P21580 790 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 ACAT1P24752 427 aaKnown RBP13□□□□□ -0.33
CAPN9-203ENST00000366666 CDR2Q01850 454 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 WHAMMP3Q1A5X7 153 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 TMEM240Q5SV17 173 aa13□□□□□ -0.33
CAPN9-203ENST00000366666 BEND6Q5SZJ8 279 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms