RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 NRXN2Q9P2S2 1712 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 UTRNP46939 3433 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 ASMTLO95671 621 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 CST3P01034 146 aaPredicted RBP15.37■□□□□ 0.05
SMTN-202ENST00000347557 ACO1P21399 889 aaKnown RBP15.37■□□□□ 0.05
SMTN-202ENST00000347557 ADRA1DP25100 572 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 PEX19P40855 299 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 LMNB2Q03252 620 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 EMC2Q15006 297 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 TMEM132AQ24JP5 1023 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 SPOCD1Q6ZMY3 1216 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 CDR2LQ86X02 465 aaPredicted RBP15.37■□□□□ 0.05
SMTN-202ENST00000347557 SAMD3Q8N6K7 520 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 AKT1S1Q96B36 256 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 RAB3IPQ96QF0 476 aaPredicted RBP15.37■□□□□ 0.05
SMTN-202ENST00000347557 HAPLN2Q9GZV7 340 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 SLC9A2Q9UBY0 812 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.37■□□□□ 0.05
SMTN-202ENST00000347557 USH1CQ9Y6N9 552 aa15.37■□□□□ 0.05
SMTN-202ENST00000347557 ONECUT3O60422 494 aaPredicted RBP15.36■□□□□ 0.05
SMTN-202ENST00000347557 GCAP28676 217 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 OGDHQ02218 1023 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 TAF1BQ53T94 588 aaPredicted RBP15.36■□□□□ 0.05
SMTN-202ENST00000347557 ANKRD20A2Q5SQ80 823 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 ANKRD20A1Q5TYW2 823 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 ANKRD20A3Q5VUR7 823 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 RNF43Q68DV7 783 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 ZNF677Q86XU0 584 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 RCOR2Q8IZ40 523 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 ASAP3Q8TDY4 903 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 RBM41Q96IZ5 413 aaKnown RBP15.36■□□□□ 0.05
SMTN-202ENST00000347557 GINM1Q9NU53 330 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 NXF1Q9UBU9 619 aaKnown RBP15.36■□□□□ 0.05
SMTN-202ENST00000347557 WNT10BO00744 389 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 PLA2G6O60733 806 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 TNFSF9P41273 254 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 BASP1P80723 227 aaKnown RBP15.36■□□□□ 0.05
SMTN-202ENST00000347557 PSMD6Q15008 389 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 ANKRD23Q86SG2 305 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 PALM2Q8IXS6 379 aa15.36■□□□□ 0.05
SMTN-202ENST00000347557 UTP4Q969X6 686 aaKnown RBP15.36■□□□□ 0.05
SMTN-202ENST00000347557 PEX10O60683 326 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 RAD23BP54727 409 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 TFAMQ00059 246 aaKnown RBP15.35■□□□□ 0.05
SMTN-202ENST00000347557 ZBTB16Q05516 673 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 HIF1AQ16665 826 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 EAPPQ56P03 285 aaPredicted RBP15.35■□□□□ 0.05
SMTN-202ENST00000347557 ANKRD22Q5VYY1 191 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 ARMC3Q5W041 872 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 GPAT2Q6NUI2 795 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 C3orf62Q6ZUJ4 267 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 MTDHQ86UE4 582 aaKnown RBP15.35■□□□□ 0.05
SMTN-202ENST00000347557 GRAMD1AQ96CP6 724 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 SPDL1Q96EA4 605 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 NTPCRQ9BSD7 190 aaKnown RBP15.35■□□□□ 0.05
SMTN-202ENST00000347557 SYNCQ9H7C4 482 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 LTBP4Q8N2S1 1624 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 PIK3R2O00459 728 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 ZC3H11AO75152 810 aaKnown RBP eCLIP15.35■□□□□ 0.05
SMTN-202ENST00000347557 EGFRP00533 1210 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 PLEKHA7Q6IQ23 1121 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 ASRGL1Q7L266 308 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 VSIG10LQ86VR7 867 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 EMC1Q8N766 993 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 KLHL23Q8NBE8 558 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 RSAD2Q8WXG1 361 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 NUDCD1Q96RS6 583 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 MTMR12Q9C0I1 747 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 TJP2Q9UDY2 1190 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 ZFP69BQ9UJL9 534 aa15.35■□□□□ 0.05
SMTN-202ENST00000347557 ZMYND8Q9ULU4 1186 aaPredicted RBP15.35■□□□□ 0.05
SMTN-202ENST00000347557 TTLL13PA6NNM8 815 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 TCEA3O75764 348 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 PDHA1P08559 390 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 PCK1P35558 622 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 CTCFP49711 727 aaPredicted RBP15.34■□□□□ 0.05
SMTN-202ENST00000347557 GDF10P55107 478 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 MYL6P60660 151 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 BZW1Q7L1Q6 419 aaKnown RBP15.34■□□□□ 0.05
SMTN-202ENST00000347557 EEPD1Q7L9B9 569 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 OTOAQ7RTW8 1153 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 ALLCQ8N6M5 410 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 TTC8Q8TAM2 541 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 CFAP69A5D8W1 941 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 CST8O60676 142 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 ENTPD5O75356 428 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 KRT19P08727 400 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 SRGAP2CP0DJJ0 459 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 FGFR1P11362 822 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 PSMA2P25787 234 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 HIRAP54198 1017 aaPredicted RBP15.34■□□□□ 0.05
SMTN-202ENST00000347557 WDR72Q3MJ13 1102 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 RFX8Q6ZV50 586 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 TMEM130Q8N3G9 435 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 ACTL9Q8TC94 416 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 ZNF75CPQ92670 426 aaPredicted RBP15.34■□□□□ 0.05
SMTN-202ENST00000347557 C2orf71A6NGG8 1288 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 VWA5AO00534 786 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 RPS6KA3P51812 740 aa15.34■□□□□ 0.05
SMTN-202ENST00000347557 OTUD4Q01804 1114 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms