RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ITGB5P18084 799 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 GPD1P21695 349 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 SPDYE2Q495Y8 402 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 CRY2Q49AN0 593 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 ARID3BQ8IVW6 561 aaPredicted RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 SCN4BQ8IWT1 228 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 PGBD4Q96DM1 585 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 CHST7Q9NS84 486 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 NID2Q14112 1375 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 SPDYE16A6NNV3 312 aaPredicted RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 ITGB3P05106 788 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 PPATQ06203 517 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 HYIQ5T013 277 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 AP1ARQ63HQ0 302 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 ITPRIPL1Q6GPH6 555 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 TRIM67Q6ZTA4 783 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 LONP2Q86WA8 852 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 PRELID2Q8N945 189 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 AGR3Q8TD06 166 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 ALG3Q92685 438 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 PCMTD2Q9NV79 361 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 SALL4Q9UJQ4 1053 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.53□□□□□ -1.2
VCAN-202ENST00000342785 MYO5BQ9ULV0 1848 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 ANKRD26Q9UPS8 1709 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 B2RBV5 119 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 MARCKSL1P49006 195 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 POU5F1BQ06416 359 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 TFDP3Q5H9I0 405 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 CAPRIN2Q6IMN6 1127 aaKnown RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 AADACL2Q6P093 401 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 SPOCD1Q6ZMY3 1216 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 FASTKD5Q7L8L6 764 aaKnown RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 NIPA1Q7RTP0 329 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 ZNF518BQ9C0D4 1074 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 ERAP1Q9NZ08 941 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 PHTF1Q9UMS5 762 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 PIN4Q9Y237 131 aaKnown RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 SH3BP5O60239 455 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 ENO1P06733 434 aaKnown RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 FECHP22830 423 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 MARSP56192 900 aaKnown RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 BMT2Q1RMZ1 405 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 DCLK3Q9C098 648 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 DYNC1LI2O43237 492 aaPredicted RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 PMLP29590 882 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 C1QBPQ07021 282 aaKnown RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 KIF22Q14807 665 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 ZCWPW2Q504Y3 356 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 KRT80Q6KB66 452 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 KLC3Q6P597 504 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 MFSD7Q6UXD7 560 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 ACAD11Q709F0 780 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 SLC9A9Q8IVB4 645 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 CD302Q8IX05 232 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 FBXO36Q8NEA4 188 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 SLC26A7Q8TE54 656 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 SHC3Q92529 594 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 EXT2Q93063 718 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 MTBPQ96DY7 904 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 FAM111AQ96PZ2 611 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 MANSC1Q9H8J5 431 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 AVENQ9NQS1 362 aaPredicted RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 RNF181Q9P0P0 153 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 PIK3CDO00329 1044 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 WNT10BO00744 389 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 TRAPPC3O43617 180 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 MOCS2O96007 188 aaPredicted RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 MYL3P08590 195 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 KCTD19Q17RG1 926 aaPredicted RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 NLRP9Q7RTR0 991 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 SPDL1Q96EA4 605 aa7.53□□□□□ -1.2
VCAN-202ENST00000342785 FRMD8Q9BZ67 464 aaPredicted RBP7.53□□□□□ -1.2
VCAN-202ENST00000342785 PEAK1Q9H792 1746 aa7.52□□□□□ -1.2
VCAN-202ENST00000342785 KIF3CO14782 793 aa7.52□□□□□ -1.2
VCAN-202ENST00000342785 TNFRSF8P28908 595 aa7.52□□□□□ -1.2
VCAN-202ENST00000342785 SERPINB9P50453 376 aa7.52□□□□□ -1.2
VCAN-202ENST00000342785 ALDH18A1P54886 795 aaKnown RBP7.52□□□□□ -1.2
VCAN-202ENST00000342785 ITIH4Q14624 930 aa7.52□□□□□ -1.2
VCAN-202ENST00000342785 SPOUT1Q5T280 376 aaKnown RBP7.52□□□□□ -1.2
VCAN-202ENST00000342785 C4orf50Q6ZRC1 276 aa7.52□□□□□ -1.2
VCAN-202ENST00000342785 PACS2Q86VP3 889 aa7.52□□□□□ -1.2
VCAN-202ENST00000342785 OR6P1Q8NGX9 317 aa7.52□□□□□ -1.2
VCAN-202ENST00000342785 PIP4K2CQ8TBX8 421 aa7.52□□□□□ -1.2
VCAN-202ENST00000342785 SCG3Q8WXD2 468 aaKnown RBP7.52□□□□□ -1.2
VCAN-202ENST00000342785 HES6Q96HZ4 224 aa7.52□□□□□ -1.2
VCAN-202ENST00000342785 TSC22D3Q99576 134 aa7.52□□□□□ -1.2
VCAN-202ENST00000342785 FSD1LQ9BXM9 530 aa7.52□□□□□ -1.2
VCAN-202ENST00000342785 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.52□□□□□ -1.2
VCAN-202ENST00000342785 PPP1R12AO14974 1030 aaPredicted RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 NOL4O94818 638 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 SLC25A27O95847 323 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 NLRP11P59045 1033 aaKnown RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 TMEM62Q0P6H9 643 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 MROH9Q5TGP6 573 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 E2F7Q96AV8 911 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 GLIS2Q9BZE0 524 aaPredicted RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 GTSE1Q9NYZ3 720 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 SLIT3O75094 1523 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 CCDC78A2IDD5 438 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms