RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ALG13Q9NP73 1137 aaKnown RBP17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 AVENQ9NQS1 362 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 SAE1Q9UBE0 346 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 SCINQ9Y6U3 715 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 EXTL3O43909 919 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 TCF4P15884 667 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 HMGB2P26583 209 aaKnown RBP17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 GTF2H1P32780 548 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 MSH2P43246 934 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 RNASELQ05823 741 aaKnown RBP17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 SPARCL1Q14515 664 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 ZNF668Q96K58 619 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 LRRC37BQ96QE4 947 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 KLF6Q99612 283 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 SENP7Q9BQF6 1050 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 RXFP1Q9HBX9 757 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 CYP26B1Q9NR63 512 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 PARVAQ9NVD7 372 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 DNAAF2Q9NVR5 837 aaKnown RBP17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 PCDHGA4Q9Y5G9 962 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 BANF1O75531 89 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 ATP2A2P16615 1042 aaKnown RBP17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 TARSP26639 723 aaKnown RBP17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 PKN2Q16513 984 aaKnown RBP17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 SMTNL2Q2TAL5 461 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 ACBD5Q5T8D3 534 aaPredicted RBP17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 CCDC60Q8IWA6 550 aaPredicted RBP17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 ABRAQ8N0Z2 381 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 L3MBTL3Q96JM7 780 aaPredicted RBP17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 ZMYND8Q9ULU4 1186 aaPredicted RBP17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 IVNS1ABPQ9Y6Y0 642 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 F8VP50 259 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 TP73O15350 636 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 FDX1P10109 184 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 GARTP22102 1010 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 SESN3P58005 492 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 OSTNP61366 133 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 ZBTB41Q5SVQ8 909 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 TMEM237Q96Q45 408 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 SLC9A2Q9UBY0 812 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 FBXO40Q9UH90 709 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 DCTN4Q9UJW0 460 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 PHTF1Q9UMS5 762 aa17.4■□□□□ 0.38
CDC42EP4-201ENST00000335793 FOXN2P32314 431 aa17.39■□□□□ 0.38
CDC42EP4-201ENST00000335793 ZNF677Q86XU0 584 aa17.39■□□□□ 0.38
CDC42EP4-201ENST00000335793 WNK4Q96J92 1243 aa17.39■□□□□ 0.38
CDC42EP4-201ENST00000335793 HAO1Q9UJM8 370 aa17.39■□□□□ 0.38
CDC42EP4-201ENST00000335793 UMODL1Q5DID0 1318 aa17.39■□□□□ 0.38
CDC42EP4-201ENST00000335793 SCN9AQ15858 1988 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 PSTPIP1O43586 416 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 PLA2G6O60733 806 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 WNT7BP56706 349 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 NCOA4Q13772 614 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 KCNT1Q5JUK3 1230 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 CYP4A22Q5TCH4 519 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 GALNT15Q8N3T1 639 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 SPIRE2Q8WWL2 714 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 SLC7A3Q8WY07 619 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 LPAR1Q92633 364 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 IP6K2Q9UHH9 426 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 WNT10BO00744 389 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 PMM2O15305 246 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 GCLCP48506 637 aaPredicted RBP17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 ACTR2P61160 394 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 TRPC3Q13507 836 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 ZACNQ401N2 412 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 FAM182AQ5T1J6 154 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 PRAMEF18Q5VWM3 479 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 CENPUQ71F23 418 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 EXD1Q8NHP7 514 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 NXF1Q9UBU9 619 aaKnown RBP17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 FZD1Q9UP38 647 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 CNTNAP1P78357 1384 aa17.39■□□□□ 0.37
CDC42EP4-201ENST00000335793 WEE2P0C1S8 567 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 TAC1P20366 129 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 NOMO3P69849 1222 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 BNIP1Q12981 228 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 MKRN3Q13064 507 aaKnown RBP17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 BBS9Q3SYG4 887 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 PALM2Q8IXS6 379 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 TTLL6Q8N841 843 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 OR5B17Q8NGF7 314 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 PYROXD1Q8WU10 500 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 ZNF606Q8WXB4 792 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 SLCO2A1Q92959 643 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 KIAA1586Q9HCI6 787 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 PREBQ9HCU5 417 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 XPNPEP1Q9NQW7 623 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 NUB1Q9Y5A7 615 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 A6NHS1 94 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 KRT19P08727 400 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 TFAMQ00059 246 aaKnown RBP17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 ZBTB16Q05516 673 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 PRKG1Q13976 671 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 EMC2Q15006 297 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 MON1BQ7L1V2 547 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 ANKS1BQ7Z6G8 1248 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 ECHDC2Q86YB7 292 aa17.38■□□□□ 0.37
CDC42EP4-201ENST00000335793 NSUN6Q8TEA1 469 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms