RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 MEIS3P2A8K0S8 358 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 RB1P06400 928 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 ALDH7A1P49419 539 aaKnown RBP10.11□□□□□ -0.79
C11orf54-201ENST00000331239 CREMQ03060 361 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 TRIM72Q6ZMU5 477 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 RRAGAQ7L523 313 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 HDXQ7Z353 690 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 METTL23Q86XA0 190 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 HERC6Q8IVU3 1022 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 CRYBG2Q8N1P7 616 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 KREMEN1Q96MU8 473 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 CWH43Q9H720 699 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 LZTS1Q9Y250 596 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 A0A1W2PPC1 479 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 GABRDO14764 452 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 CILPO75339 1184 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 POMCP01189 267 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 ATP1A1P05023 1023 aaKnown RBP10.11□□□□□ -0.79
C11orf54-201ENST00000331239 GALTP07902 379 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 FGFR1P11362 822 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 CLCNKBP51801 687 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 VSNL1P62760 191 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 PTK2Q05397 1052 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 CKAP4Q07065 602 aaKnown RBP10.11□□□□□ -0.79
C11orf54-201ENST00000331239 GPS2Q13227 327 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 ASIC2Q16515 512 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 GLRA4Q5JXX5 417 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 PAPD7Q5XG87 772 aaKnown RBP10.11□□□□□ -0.79
C11orf54-201ENST00000331239 ARHGEF19Q8IW93 802 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 TATDN2Q93075 761 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 TNIP3Q96KP6 325 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 CALR3Q96L12 384 aaKnown RBP10.11□□□□□ -0.79
C11orf54-201ENST00000331239 ZNF558Q96NG5 402 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 GDF15Q99988 308 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 TFR2Q9UP52 801 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 INPP5FQ9Y2H2 1132 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 PCDHA11Q9Y5I1 949 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 SAR1BQ9Y6B6 198 aa10.11□□□□□ -0.79
C11orf54-201ENST00000331239 SF3B1O75533 1304 aaKnown RBP eCLIP10.11□□□□□ -0.79
C11orf54-201ENST00000331239 ERICH4A6NGS2 130 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 H7C4K7 107 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 ENC1O14682 589 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 MED7O43513 233 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 DDHD2O94830 711 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 OAZ2O95190 189 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 ACRP10323 421 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 ATP2A2P16615 1042 aaKnown RBP10.1□□□□□ -0.79
C11orf54-201ENST00000331239 PCSK1P29120 753 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 VAV2P52735 878 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 PLCB3Q01970 1234 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 UBE3AQ05086 875 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 MAPRE1Q15691 268 aaKnown RBP10.1□□□□□ -0.79
C11orf54-201ENST00000331239 TAF3Q5VWG9 929 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 CD300LGQ6UXG3 332 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 IRF2BP2Q7Z5L9 587 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 FIBCD1Q8N539 461 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 SENP8Q96LD8 212 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 TSGA10Q9BZW7 698 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 ZNF518BQ9C0D4 1074 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 GPR88Q9GZN0 384 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 LACRTQ9GZZ8 138 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 ABCB6Q9NP58 842 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 LUC7LQ9NQ29 371 aaKnown RBP10.1□□□□□ -0.79
C11orf54-201ENST00000331239 CISHQ9NSE2 258 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.1□□□□□ -0.79
C11orf54-201ENST00000331239 ADAM28Q9UKQ2 775 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 PCDHB12Q9Y5F1 795 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 LRRC53A6NM62 1247 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 FOXN3O00409 490 aaPredicted RBP10.1□□□□□ -0.79
C11orf54-201ENST00000331239 CYB561D2O14569 222 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 EPHB6O15197 1021 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 B3GAT3O94766 335 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 FGFR3P22607 806 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 MAGEA10P43363 369 aaPredicted RBP10.1□□□□□ -0.79
C11orf54-201ENST00000331239 KIF5AQ12840 1032 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 BTG3Q14201 252 aaPredicted RBP10.1□□□□□ -0.79
C11orf54-201ENST00000331239 SPA17Q15506 151 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 WDR93Q6P2C0 686 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 DSTYKQ6XUX3 929 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 RNF168Q8IYW5 571 aaPredicted RBP10.1□□□□□ -0.79
C11orf54-201ENST00000331239 THEM5Q8N1Q8 247 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 RPGRIP1Q96KN7 1286 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 CCDC42Q96M95 316 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 CEP295NLQ96MC4 621 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 YME1L1Q96TA2 773 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 ACBD6Q9BR61 282 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 NT5C1AQ9BXI3 368 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 SPG21Q9NZD8 308 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 L1RE1Q9UN81 338 aa10.1□□□□□ -0.79
C11orf54-201ENST00000331239 RCCD1A6NED2 376 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 OR6C75A6NL08 312 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 C5orf67F2Z3F1 127 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 H3BQF6 201 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 NRP1O14786 923 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 TADA2AO75478 443 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 LCA5LO95447 670 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 VDRP11473 427 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 EPHB4P54760 987 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 BCAR1P56945 870 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 DEFB103AP81534 67 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms