RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 PIK3R1P27986 724 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 CHI3L1P36222 383 aaPredicted RBP16.11■□□□□ 0.17
HCFC1-201ENST00000310441 ZCWPW2Q504Y3 356 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 UNC45BQ8IWX7 931 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 ZNF333Q96JL9 665 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 RAD54BQ9Y620 910 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 FYNP06241 537 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 LCP1P13796 627 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 CYP51A1Q16850 503 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 ZFRQ96KR1 1074 aaKnown RBP16.11■□□□□ 0.17
HCFC1-201ENST00000310441 YIPF2Q9BWQ6 316 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 OSBPL6Q9BZF3 934 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 ATP9BO43861 1147 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 GEMIN4P57678 1058 aaKnown RBP16.11■□□□□ 0.17
HCFC1-201ENST00000310441 CHRNB3Q05901 458 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 GRAPQ13588 217 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 CYFIP1Q7L576 1253 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 GRAPLQ8TC17 118 aaPredicted RBP16.11■□□□□ 0.17
HCFC1-201ENST00000310441 ERP27Q96DN0 273 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 UBE2OQ9C0C9 1292 aaKnown RBP16.11■□□□□ 0.17
HCFC1-201ENST00000310441 PHACTR1Q9C0D0 580 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 CPSF1Q10570 1443 aaKnown RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 POTEMA6NI47 508 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 SLC16A4O15374 487 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 PSTPIP1O43586 416 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 PPP2R1BP30154 601 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 YWHABP31946 246 aaKnown RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 GRM4Q14833 912 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 SLC20A1Q8WUM9 679 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 DDX17Q92841 729 aaKnown RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 LRRC39Q96DD0 335 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 CACNA2D2Q9NY47 1150 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 F8W810 466 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 CNOT3O75175 753 aaKnown RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 LRRC14Q15048 493 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 ZCCHC8Q6NZY4 707 aaKnown RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 C3orf62Q6ZUJ4 267 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 C1orf54Q8WWF1 131 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 KLHL4Q9C0H6 718 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 SLCO1B7G3V0H7 640 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 DARSP14868 501 aaKnown RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 TKTP29401 623 aaKnown RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 HARS2P49590 506 aaKnown RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 GALNT4Q8N4A0 578 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 PCMTD2Q9NV79 361 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 FAM153AQ9UHL3 310 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 NEO1Q92859 1461 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 ZW10O43264 779 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 PRDM15P57071 1507 aaPredicted RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 A2ML1A8K2U0 1454 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 NLRP1Q9C000 1473 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 L3MBTL3Q96JM7 780 aaPredicted RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 ACAD9Q9H845 621 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 IARS2Q9NSE4 1012 aaKnown RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 SPASTQ9UBP0 616 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 VWA5AO00534 786 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 ALOX15P16050 662 aaPredicted RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 HNMTP50135 292 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 PPP1R14AQ96A00 147 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 EEF2KO00418 725 aaKnown RBP16.1■□□□□ 0.17
HCFC1-201ENST00000310441 PSMD14O00487 310 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 MAGEB2O15479 319 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 SERPINB8P50452 374 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 CLEC16AQ2KHT3 1053 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 CXorf56Q9H5V9 222 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 PCDHA10Q9Y5I2 948 aa16.1■□□□□ 0.17
HCFC1-201ENST00000310441 GSTA3Q16772 222 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 CCDC24Q8N4L8 307 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 EIF2AK1Q9BQI3 630 aaKnown RBP16.09■□□□□ 0.17
HCFC1-201ENST00000310441 AMACRQ9UHK6 382 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 TIMM44O43615 452 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 ASMTLO95671 621 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 RASGRP2Q7LDG7 609 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 NT5DC4Q86YG4 428 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 PPIL6Q8IXY8 311 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 QKIQ96PU8 341 aaKnown RBP eCLIP16.09■□□□□ 0.17
HCFC1-201ENST00000310441 USP17L5A8MUK1 530 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 KLHL3Q9UH77 587 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 ATP2C1P98194 919 aaPredicted RBP16.09■□□□□ 0.17
HCFC1-201ENST00000310441 SV2CQ496J9 727 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 ZNF772Q68DY9 489 aaPredicted RBP16.09■□□□□ 0.17
HCFC1-201ENST00000310441 SYN2Q92777 582 aaPredicted RBP16.09■□□□□ 0.17
HCFC1-201ENST00000310441 PPP1R16BQ96T49 567 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 TMEM51Q9NW97 253 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 DGAT1O75907 488 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 ATP5BP06576 529 aaKnown RBP16.09■□□□□ 0.17
HCFC1-201ENST00000310441 RFX8Q6ZV50 586 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 GAS2L3Q86XJ1 694 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 EFCAB1Q9HAE3 211 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.09■□□□□ 0.17
HCFC1-201ENST00000310441 PRR23AA6NEV1 266 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 PDE5AO76074 875 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 CIAPIN1Q6FI81 312 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 MMGT1Q8N4V1 131 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 PUS7LQ9H0K6 701 aaKnown RBP16.09■□□□□ 0.17
HCFC1-201ENST00000310441 NBPF26B4DH59 902 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 CDC25AP30304 524 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 SESN2P58004 480 aaPredicted RBP16.09■□□□□ 0.17
HCFC1-201ENST00000310441 LRRC36Q1X8D7 754 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 GLYCTKQ8IVS8 523 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms