RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 TPM1P09493 284 aa21.86■■□□□ 1.09
PNKP-215ENST00000600910 PNMA6AP0CW24 399 aaPredicted RBP21.86■■□□□ 1.09
PNKP-215ENST00000600910 FGFR3P22607 806 aa21.86■■□□□ 1.09
PNKP-215ENST00000600910 WARSP23381 471 aaKnown RBP21.86■■□□□ 1.09
PNKP-215ENST00000600910 ERVK-21P61565 698 aa21.86■■□□□ 1.09
PNKP-215ENST00000600910 INCA1Q0VD86 236 aa21.86■■□□□ 1.09
PNKP-215ENST00000600910 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.86■■□□□ 1.09
PNKP-215ENST00000600910 METTL23Q86XA0 190 aa21.86■■□□□ 1.09
PNKP-215ENST00000600910 OR6B3Q8NGW1 331 aa21.86■■□□□ 1.09
PNKP-215ENST00000600910 SAMD11Q96NU1 681 aa21.86■■□□□ 1.09
PNKP-215ENST00000600910 FAM124BQ9H5Z6 455 aaPredicted RBP21.86■■□□□ 1.09
PNKP-215ENST00000600910 SLC28A3Q9HAS3 691 aa21.86■■□□□ 1.09
PNKP-215ENST00000600910 LUC7L2Q9Y383 392 aaKnown RBP21.86■■□□□ 1.09
PNKP-215ENST00000600910 PCDHB4Q9Y5E5 795 aa21.86■■□□□ 1.09
PNKP-215ENST00000600910 VWA8A3KMH1 1905 aa21.86■■□□□ 1.09
PNKP-215ENST00000600910 CHD7Q9P2D1 2997 aa21.86■■□□□ 1.09
PNKP-215ENST00000600910 FOXN3O00409 490 aaPredicted RBP21.85■■□□□ 1.09
PNKP-215ENST00000600910 GABRDO14764 452 aa21.85■■□□□ 1.09
PNKP-215ENST00000600910 SOD2P04179 222 aa21.85■■□□□ 1.09
PNKP-215ENST00000600910 FAM163BP0C2L3 166 aa21.85■■□□□ 1.09
PNKP-215ENST00000600910 YWHAHQ04917 246 aaPredicted RBP21.85■■□□□ 1.09
PNKP-215ENST00000600910 USP41Q3LFD5 358 aa21.85■■□□□ 1.09
PNKP-215ENST00000600910 RTP2Q5QGT7 225 aa21.85■■□□□ 1.09
PNKP-215ENST00000600910 OVOS1Q6IE37 1185 aa21.85■■□□□ 1.09
PNKP-215ENST00000600910 TMEM270Q6UE05 265 aa21.85■■□□□ 1.09
PNKP-215ENST00000600910 OSTM1Q86WC4 334 aa21.85■■□□□ 1.09
PNKP-215ENST00000600910 ZNF397Q8NF99 534 aaPredicted RBP21.85■■□□□ 1.09
PNKP-215ENST00000600910 SNX25Q9H3E2 840 aa21.85■■□□□ 1.09
PNKP-215ENST00000600910 HMGXB4Q9UGU5 601 aa21.85■■□□□ 1.09
PNKP-215ENST00000600910 BARX2Q9UMQ3 279 aaPredicted RBP21.85■■□□□ 1.09
PNKP-215ENST00000600910 NME7Q9Y5B8 376 aa21.85■■□□□ 1.09
PNKP-215ENST00000600910 LRRC53A6NM62 1247 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 HCRTO43612 131 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 CILPO75339 1184 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 RB1P06400 928 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 KRT5P13647 590 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 GNL1P36915 607 aaPredicted RBP21.84■■□□□ 1.09
PNKP-215ENST00000600910 USP8P40818 1118 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 LHX1P48742 406 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 NDST1P52848 882 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 ZBED6P86452 979 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 ZNF394Q53GI3 561 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 TTC39CQ8N584 583 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 SPATA18Q8TC71 538 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 TTPALQ9BTX7 342 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 HERC2P3Q9BVR0 1158 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 CERS4Q9HA82 394 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 ALG13Q9NP73 1137 aaKnown RBP21.84■■□□□ 1.09
PNKP-215ENST00000600910 DDX43Q9NXZ2 648 aaKnown RBP21.84■■□□□ 1.09
PNKP-215ENST00000600910 STXBP5LQ9Y2K9 1186 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 PLXNA4Q9HCM2 1894 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 A8MXQ7 604 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 LMO2P25791 158 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 KRT9P35527 623 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 GOLGA8FQ08AF8 430 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 GOLGA8DPQ0D2H9 430 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 VARS2Q5ST30 1063 aaKnown RBP21.84■■□□□ 1.09
PNKP-215ENST00000600910 PDXDC1Q6P996 788 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 VPS52Q8N1B4 723 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 WHAMMQ8TF30 809 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 TIFAQ96CG3 184 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 TWNKQ96RR1 684 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 C11orf84Q9BUA3 381 aaPredicted RBP21.84■■□□□ 1.09
PNKP-215ENST00000600910 CHST7Q9NS84 486 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 IMPACTQ9P2X3 320 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 STK39Q9UEW8 545 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 MYO6Q9UM54 1294 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 CNTN6Q9UQ52 1028 aa21.84■■□□□ 1.09
PNKP-215ENST00000600910 MFAP3LO75121 409 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 OAZ2O95190 189 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 PDGFRBP09619 1106 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 SOX5P35711 763 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 STAT1P42224 750 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 ADKP55263 362 aaKnown RBP21.83■■□□□ 1.08
PNKP-215ENST00000600910 ORC1Q13415 861 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 LRIT3Q3SXY7 679 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 PRPF38BQ5VTL8 546 aaKnown RBP21.83■■□□□ 1.08
PNKP-215ENST00000600910 KIAA1841Q6NSI8 718 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 UNC93AQ86WB7 457 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 GPIHBP1Q8IV16 184 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 FAM71AQ8IYT1 594 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 RBBP8NLQ8NC74 664 aaPredicted RBP21.83■■□□□ 1.08
PNKP-215ENST00000600910 FBXO22Q8NEZ5 403 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 RTP3Q9BQQ7 232 aa21.83■■□□□ 1.08
PNKP-215ENST00000600910 PUF60Q9UHX1 559 aaKnown RBP21.83■■□□□ 1.08
PNKP-215ENST00000600910 AKR1B15C9JRZ8 316 aaPredicted RBP21.82■■□□□ 1.08
PNKP-215ENST00000600910 GFPT2O94808 682 aa21.82■■□□□ 1.08
PNKP-215ENST00000600910 ACAT1P24752 427 aaKnown RBP21.82■■□□□ 1.08
PNKP-215ENST00000600910 MRPL58Q14197 206 aaKnown RBP21.82■■□□□ 1.08
PNKP-215ENST00000600910 THEM5Q8N1Q8 247 aa21.82■■□□□ 1.08
PNKP-215ENST00000600910 SPPL3Q8TCT6 385 aa21.82■■□□□ 1.08
PNKP-215ENST00000600910 RIN2Q8WYP3 895 aaPredicted RBP21.82■■□□□ 1.08
PNKP-215ENST00000600910 NT5C1AQ9BXI3 368 aa21.82■■□□□ 1.08
PNKP-215ENST00000600910 ELOVL4Q9GZR5 314 aa21.82■■□□□ 1.08
PNKP-215ENST00000600910 LZTS1Q9Y250 596 aa21.82■■□□□ 1.08
PNKP-215ENST00000600910 C2CD2LO14523 706 aa21.81■■□□□ 1.08
PNKP-215ENST00000600910 CYP26A1O43174 497 aa21.81■■□□□ 1.08
PNKP-215ENST00000600910 GLUD2P49448 558 aa21.81■■□□□ 1.08
PNKP-215ENST00000600910 ZNF132P52740 706 aa21.81■■□□□ 1.08
PNKP-215ENST00000600910 RAD23BP54727 409 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms