RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 TMEM200CA6NKL6 621 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 MARCH6O60337 910 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 MATN4O95460 622 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 SOX8P57073 446 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 LLGL1Q15334 1064 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 PREPLQ4J6C6 727 aaPredicted RBP6.11□□□□□ -1.43
SMAD4-216ENST00000593223 ANO6Q4KMQ2 910 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 OVCH2Q7RTZ1 564 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 CFAP52Q8N1V2 620 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 Q8N1X5 172 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 NSUN7Q8NE18 718 aaKnown RBP6.11□□□□□ -1.43
SMAD4-216ENST00000593223 NEU4Q8WWR8 484 aaPredicted RBP6.11□□□□□ -1.43
SMAD4-216ENST00000593223 LRFN3Q9BTN0 628 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 MLST8Q9BVC4 326 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 B3GNT5Q9BYG0 378 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 SIK2Q9H0K1 926 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 RSAD1Q9HA92 442 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 GALNT9Q9HCQ5 603 aa6.11□□□□□ -1.43
SMAD4-216ENST00000593223 TESQ9UGI8 421 aaKnown RBP6.11□□□□□ -1.43
SMAD4-216ENST00000593223 PBRM1Q86U86 1689 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 A0A1W2PPL8 197 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 POLRMTO00411 1230 aaKnown RBP6.1□□□□□ -1.43
SMAD4-216ENST00000593223 TOR1BO14657 336 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 TUSC2O75896 110 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 CHEK2O96017 543 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 HDCP19113 662 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 TP53BP2Q13625 1128 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 NPNTQ6UXI9 565 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 COLGALT2Q8IYK4 626 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 BOD1Q96IK1 185 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 TRIB1Q96RU8 372 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 CNPPD1Q9BV87 410 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 PRDM11Q9NQV5 511 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 DDX20Q9UHI6 824 aaKnown RBP6.1□□□□□ -1.43
SMAD4-216ENST00000593223 MAP3K4Q9Y6R4 1608 aa6.1□□□□□ -1.43
SMAD4-216ENST00000593223 PLB1Q6P1J6 1458 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 FRMPD2Q68DX3 1309 aaPredicted RBP6.09□□□□□ -1.43
SMAD4-216ENST00000593223 CCDC195A0A1B0GUA6 201 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 CAPN8A6NHC0 703 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 PRSS29PA6NIE9 313 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 MARCH11A6NNE9 402 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 FAM227AF5H4B4 570 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 M0QYG6 137 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 VPS4BO75351 444 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 SPDEFO95238 335 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 KCNA2P16389 499 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 GPSM2P81274 684 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 SETQ01105 290 aaPredicted RBP6.09□□□□□ -1.43
SMAD4-216ENST00000593223 FPGSQ05932 587 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 CRB2Q5IJ48 1285 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 TAPT1Q6NXT6 567 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 SLC30A10Q6XR72 485 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 CCDC149Q6ZUS6 474 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 RHOUQ7L0Q8 258 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 CLNKQ7Z7G1 428 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 USP37Q86T82 979 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 ARHGEF19Q8IW93 802 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 LCORLQ8N3X6 602 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 CELF5Q8N6W0 485 aaKnown RBP6.09□□□□□ -1.43
SMAD4-216ENST00000593223 DDX17Q92841 729 aaKnown RBP6.09□□□□□ -1.43
SMAD4-216ENST00000593223 TMEM125Q96AQ2 219 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 CCDC136Q96JN2 1154 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 NT5C1BQ96P26 610 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 ADAM2Q99965 735 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 WDR11Q9BZH6 1224 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 TINAGL1Q9GZM7 467 aaPredicted RBP6.09□□□□□ -1.43
SMAD4-216ENST00000593223 TMEM60Q9H2L4 133 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 PRDM16Q9HAZ2 1276 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 GPR35Q9HC97 309 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 PIH1D1Q9NWS0 290 aaKnown RBP6.09□□□□□ -1.43
SMAD4-216ENST00000593223 OBP2AQ9NY56 170 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 NEU2Q9Y3R4 380 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 RIPOR2Q9Y4F9 1068 aa6.09□□□□□ -1.43
SMAD4-216ENST00000593223 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
SMAD4-216ENST00000593223 RIMS1Q86UR5 1692 aaKnown RBP6.09□□□□□ -1.43
SMAD4-216ENST00000593223 FGD5Q6ZNL6 1462 aa6.09□□□□□ -1.44
SMAD4-216ENST00000593223 BCORL1Q5H9F3 1711 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 TRGV11A0A075B6L2 103 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 CFAP69A5D8W1 941 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 E9PLN8 166 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 KIF20AO95235 890 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 ITGAMP11215 1152 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 HABP2Q14520 560 aaPredicted RBP6.08□□□□□ -1.44
SMAD4-216ENST00000593223 GRM3Q14832 879 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 CYP2A13Q16696 494 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 GEN1Q17RS7 908 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 EXOC8Q8IYI6 725 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 VKORC1Q9BQB6 163 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 SERHL2Q9H4I8 314 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 MYH16Q9H6N6 1097 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 CYP4F11Q9HBI6 524 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 TBCCD1Q9NVR7 557 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 AGAP1Q9UPQ3 857 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 HS3ST4Q9Y661 456 aa6.08□□□□□ -1.44
SMAD4-216ENST00000593223 EPRSP07814 1512 aaKnown RBP6.08□□□□□ -1.44
SMAD4-216ENST00000593223 LOC102724159A0A0B4J2E5 919 aa6.07□□□□□ -1.44
SMAD4-216ENST00000593223 PRAMEF33A0A0G2JMD5 474 aa6.07□□□□□ -1.44
SMAD4-216ENST00000593223 MYADML2A6NDP7 307 aa6.07□□□□□ -1.44
SMAD4-216ENST00000593223 PRAMEF10O60809 474 aa6.07□□□□□ -1.44
SMAD4-216ENST00000593223 KITP10721 976 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms