RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 PDE4DIPQ5VU43 2346 aa7.58□□□□□ -1.2
SPIDR-228ENST00000588781 UMODL1Q5DID0 1318 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 DICER1Q9UPY3 1922 aaKnown RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 SMIM23A6NLE4 172 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 O00370 1275 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 ACKR2O00590 384 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 CXCL11O14625 94 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 DNALI1O14645 258 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 MAGEB2O15479 319 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 LIASO43766 372 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 B4GALT4O60513 344 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 DNAJC8O75937 253 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 ITGAVP06756 1048 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 HSPA8P11142 646 aaKnown RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 HARSP12081 509 aaKnown RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 STX2P32856 288 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 TCF7P36402 384 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 PHKA2P46019 1235 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 SLC18A1P54219 525 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 SOX10P56693 466 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 LACTBP83111 547 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 IL9RQ01113 521 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 RASA2Q15283 850 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 STILQ15468 1287 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 CNGA2Q16280 664 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 ZNF568Q3ZCX4 644 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 TFDP3Q5H9I0 405 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 ZNF667Q5HYK9 610 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 ZNF484Q5JVG2 852 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 HIBCHQ6NVY1 386 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 SPOCD1Q6ZMY3 1216 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 TSHZ1Q6ZSZ6 1077 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 NCAPG2Q86XI2 1143 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 NT5DC4Q86YG4 428 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 GPC2Q8N158 579 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 UBR7Q8N806 425 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 PRPF31Q8WWY3 499 aaKnown RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 NKD2Q969F2 451 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 WNK4Q96J92 1243 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 SLITRK1Q96PX8 696 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 TACO1Q9BSH4 297 aaKnown RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 NFKBIZQ9BYH8 718 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 FRMD8Q9BZ67 464 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 SPATC1LQ9H0A9 340 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 RPF1Q9H9Y2 349 aaKnown RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 IFT122Q9HBG6 1241 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 APOBEC3GQ9HC16 384 aaKnown RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 PCDH9Q9HC56 1237 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 CHST7Q9NS84 486 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 CISHQ9NSE2 258 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 GGA3Q9NZ52 723 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 GPRC5DQ9NZD1 345 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 FETUBQ9UGM5 382 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 SLC24A2Q9UI40 661 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 KIAA1257Q9ULG3 409 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 TPX2Q9ULW0 747 aaKnown RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 SMG5Q9UPR3 1016 aaKnown RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 AGTPBP1Q9UPW5 1226 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 ZNF148Q9UQR1 794 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 NUB1Q9Y5A7 615 aa7.57□□□□□ -1.2
SPIDR-228ENST00000588781 COL11A1P12107 1806 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-228ENST00000588781 RLFQ13129 1914 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 WDR81Q562E7 1941 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 KIAA1217Q5T5P2 1943 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 IGKV6-21A0A0C4DH24 114 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 TCRBV7S2A1N4TA0A589 114 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 ASB14A6NK59 587 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 SIGLEC16A6NMB1 481 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 IRF6O14896 467 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 MSCO60682 206 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 ZNF189O75820 626 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-228ENST00000588781 ATP5HO75947 161 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 RNF8O76064 485 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 ACSL3O95573 720 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 MCF2P10911 925 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 ATP4AP20648 1035 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 SLC8A1P32418 973 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 MAGEA4P43358 317 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 VEGFBP49765 207 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 VCPP55072 806 aaKnown RBP7.56□□□□□ -1.2
SPIDR-228ENST00000588781 ARL4CP56559 192 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 LAMTOR4Q0VGL1 99 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 DGKZQ13574 1117 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 ZNF268Q14587 947 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-228ENST00000588781 KCTD2Q14681 263 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 FAM187BQ17R55 369 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 ANKRD20A8PQ5CZ79 823 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 CELF3Q5SZQ8 465 aaKnown RBP7.56□□□□□ -1.2
SPIDR-228ENST00000588781 ATF7IP2Q5U623 682 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 ICE2Q659A1 982 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 LMBRD2Q68DH5 695 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-228ENST00000588781 SPOPLQ6IQ16 392 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 CHADLQ6NUI6 762 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 C4orf22Q6V702 233 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 GADL1Q6ZQY3 521 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 PAXIP1Q6ZW49 1069 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-228ENST00000588781 FASTKD5Q7L8L6 764 aaKnown RBP7.56□□□□□ -1.2
SPIDR-228ENST00000588781 PIGWQ7Z7B1 504 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 PACS2Q86VP3 889 aa7.56□□□□□ -1.2
SPIDR-228ENST00000588781 PASD1Q8IV76 773 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms