RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 ARID3AQ99856 593 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 MRPL45Q9BRJ2 306 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PLVAPQ9BX97 442 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 GPR62Q9BZJ7 368 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SNX25Q9H3E2 840 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SMYD3Q9H7B4 428 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 STK39Q9UEW8 545 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 MSRAQ9UJ68 235 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 BARX2Q9UMQ3 279 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PCDHB4Q9Y5E5 795 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SF3B1O75533 1304 aaKnown RBP eCLIP9.79□□□□□ -0.841e-11■■■■■ 43.1
CDK5RAP3-220ENST00000581160 A8MXQ7 604 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 C5orf67F2Z3F1 127 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 F8VZ95 297 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 MFAP3LO75121 409 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 OAZ2O95190 189 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PAEPP09466 180 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CCDC172P0C7W6 258 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 FERP16591 822 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CD58P19256 250 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CLCN1P35523 988 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 GSDMDP57764 484 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ERVK-21P61565 698 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TSR1Q2NL82 804 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 USP41Q3LFD5 358 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TMEM270Q6UE05 265 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CHRDL2Q6WN34 429 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TAS1R1Q7RTX1 841 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CCDC186Q7Z3E2 898 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 OSTM1Q86WC4 334 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TMEM173Q86WV6 379 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 GPR65Q8IYL9 337 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ADGRF2Q8IZF7 708 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CRYBG2Q8N1P7 616 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 THEM5Q8N1Q8 247 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 KLHL23Q8NBE8 558 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 OR6B3Q8NGW1 331 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TMEM169Q96HH4 297 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PANX2Q96RD6 677 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 DNAJC7Q99615 494 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ACBD6Q9BR61 282 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PBX4Q9BYU1 374 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 DNAI2Q9GZS0 605 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CHST7Q9NS84 486 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 KIAA1257Q9ULG3 409 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 STXBP5LQ9Y2K9 1186 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 YBX2Q9Y2T7 364 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TIMM13Q9Y5L4 95 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CEP290O15078 2479 aa9.78□□□□□ -0.84
CDK5RAP3-220ENST00000581160 A0A1W2PPC1 479 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CYP26A1O43174 497 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 FGF18O76093 207 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 GFPT2O94808 682 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 SOD2P04179 222 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CA3P07451 260 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PDGFRBP09619 1106 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 KRT5P13647 590 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 LMO2P25791 158 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TKTP29401 623 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PBX2P40425 430 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 USP8P40818 1118 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PRKCIP41743 596 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ZNF132P52740 706 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 NDST1P52848 882 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 RAD23BP54727 409 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 SMAD3P84022 425 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CDK17Q00537 523 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TAP1Q03518 808 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 YWHAHQ04917 246 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PTK2Q05397 1052 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ASIC2Q16515 512 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 KIAA0319Q5VV43 1072 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 OVOS1Q6IE37 1185 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ANKS3Q6ZW76 656 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CEP57Q86XR8 500 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 SLC4A11Q8NBS3 891 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 RBBP8NLQ8NC74 664 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TMEM176AQ96HP8 235 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TGS1Q96RS0 853 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 RTP3Q9BQQ7 232 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 C17orf80Q9BSJ5 609 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TTPALQ9BTX7 342 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 HERC2P3Q9BVR0 1158 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 VN1R3Q9BXE9 311 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 NT5C1AQ9BXI3 368 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 OXCT2Q9BYC2 517 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ELOVL4Q9GZR5 314 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ABHD10Q9NUJ1 306 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ZNHIT6Q9NWK9 470 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 DDX43Q9NXZ2 648 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PUF60Q9UHX1 559 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CDH9Q9ULB4 789 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 LZTS1Q9Y250 596 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 NME7Q9Y5B8 376 aa9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 BZW2Q9Y6E2 419 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-220ENST00000581160 H7C4K7 107 aa9.76□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TBC1D4O60343 1298 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms