RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 TFIP11Q9UBB9 837 aaKnown RBP12.46□□□□□ -0.41
SSH2-208ENST00000579040 OBSL1O75147 1896 aa12.46□□□□□ -0.42
SSH2-208ENST00000579040 COL4A3Q01955 1670 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 PRR23AA6NEV1 266 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 KPNA7A9QM74 516 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 EXTL3O43909 919 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 PSMC3P17980 439 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 TUFMP49411 452 aaKnown RBP12.45□□□□□ -0.42
SSH2-208ENST00000579040 TFAMQ00059 246 aaKnown RBP12.45□□□□□ -0.42
SSH2-208ENST00000579040 VEPH1Q14D04 833 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 SLC39A12Q504Y0 691 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 ATL3Q6DD88 541 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 TPRG1Q6ZUI0 275 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 TMC8Q8IU68 726 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 C1orf210Q8IVY1 113 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 LRRC52Q8N7C0 313 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 IQUBQ8NA54 791 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 SPPL2BQ8TCT7 592 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 KCNG4Q8TDN1 519 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 IRF7Q92985 503 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 SAAL1Q96ER3 474 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 BORCS6Q96GS4 357 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 TMEM209Q96SK2 561 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 TRMT61BQ9BVS5 477 aaKnown RBP12.45□□□□□ -0.42
SSH2-208ENST00000579040 FGFBP2Q9BYJ0 223 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 BCO2Q9BYV7 579 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 TRIM9Q9C026 710 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 SLITRK6Q9H5Y7 841 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 BRD9Q9H8M2 597 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 LTB4R2Q9NPC1 389 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 TRPV5Q9NQA5 729 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 ITGA11Q9UKX5 1188 aa12.45□□□□□ -0.42
SSH2-208ENST00000579040 MRPS17Q9Y2R5 130 aaKnown RBP12.45□□□□□ -0.42
SSH2-208ENST00000579040 KIF26AQ9ULI4 1882 aaPredicted RBP12.44□□□□□ -0.42
SSH2-208ENST00000579040 NRG2O14511 850 aaPredicted RBP12.44□□□□□ -0.42
SSH2-208ENST00000579040 EIF3DO15371 548 aaKnown RBP eCLIP12.44□□□□□ -0.42
SSH2-208ENST00000579040 NCAM2O15394 837 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 PRPF6O94906 941 aaKnown RBP12.44□□□□□ -0.42
SSH2-208ENST00000579040 ZSCAN22P10073 491 aaPredicted RBP12.44□□□□□ -0.42
SSH2-208ENST00000579040 GLULP15104 373 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 UBXN2BQ14CS0 331 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 TEAD2Q15562 447 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 WSCD1Q658N2 575 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 ZC3H14Q6PJT7 736 aaKnown RBP12.44□□□□□ -0.42
SSH2-208ENST00000579040 VITQ6UXI7 678 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 ZNF852Q6ZMS4 543 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 ASCL5Q7RTU5 278 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 DNAJB7Q7Z6W7 309 aaPredicted RBP12.44□□□□□ -0.42
SSH2-208ENST00000579040 DCP1BQ8IZD4 617 aaKnown RBP12.44□□□□□ -0.42
SSH2-208ENST00000579040 GPD1LQ8N335 351 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 TTC9BQ8N6N2 239 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 C1orf127Q8N9H9 656 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 ZSCAN18Q8TBC5 510 aaPredicted RBP12.44□□□□□ -0.42
SSH2-208ENST00000579040 SPATA18Q8TC71 538 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 DHX58Q96C10 678 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 ZSWIM3Q96MP5 696 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 CBWD1Q9BRT8 395 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 SLC27A5Q9Y2P5 690 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 GVINP1Q7Z2Y8 2422 aa12.44□□□□□ -0.42
SSH2-208ENST00000579040 UBE4BO95155 1302 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 A0A1W2PRU2 124 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 GOLGA8IPA6NC78 632 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 GOLGA8JA6NMD2 632 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 FAM170BA6NMN3 283 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 MAN2B1O00754 1011 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 F13A1P00488 732 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 ITGB3P05106 788 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 GJA1P17302 382 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 POLR2BP30876 1174 aaKnown RBP12.43□□□□□ -0.42
SSH2-208ENST00000579040 RPS9P46781 194 aaKnown RBP12.43□□□□□ -0.42
SSH2-208ENST00000579040 WNT7BP56706 349 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 ASIC1P78348 528 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 TSPY1Q01534 308 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 GRM2Q14416 872 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 SURF1Q15526 300 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 ARHGAP15Q53QZ3 475 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 SHC4Q6S5L8 630 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 GAREM2Q75VX8 874 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 MFSD6LQ8IWD5 586 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 TMEM86AQ8N2M4 240 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 ZSWIM2Q8NEG5 633 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 CLDN23Q96B33 292 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 SEPT5Q99719 369 aaPredicted RBP12.43□□□□□ -0.42
SSH2-208ENST00000579040 C7orf25Q9BPX7 421 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 KIAA1586Q9HCI6 787 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 HEBP1Q9NRV9 189 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 GDAP2Q9NXN4 497 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 ZMYM5Q9UJ78 669 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 AGAP1Q9UPQ3 857 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 PTPRDP23468 1912 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 GREB1Q4ZG55 1949 aa12.43□□□□□ -0.42
SSH2-208ENST00000579040 EP300Q09472 2414 aaPredicted RBP12.42□□□□□ -0.42
SSH2-208ENST00000579040 ZNF233A6NK53 670 aa12.42□□□□□ -0.42
SSH2-208ENST00000579040 HEPACAM2A8MVW5 462 aa12.42□□□□□ -0.42
SSH2-208ENST00000579040 ZNF263O14978 683 aa12.42□□□□□ -0.42
SSH2-208ENST00000579040 HUS1O60921 280 aa12.42□□□□□ -0.42
SSH2-208ENST00000579040 LRRN2O75325 713 aa12.42□□□□□ -0.42
SSH2-208ENST00000579040 SOAT2O75908 522 aa12.42□□□□□ -0.42
SSH2-208ENST00000579040 TMEM191BP0C7N4 346 aa12.42□□□□□ -0.42
SSH2-208ENST00000579040 SP9P0CG40 484 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms