RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 KIF4AO95239 1232 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 PTP4A2Q12974 167 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 TUBB2AQ13885 445 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 TEX35Q5T0J7 233 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 TRIM72Q6ZMU5 477 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 PEX26Q7Z412 305 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 RABGGTAQ92696 567 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 TUBB2BQ9BVA1 445 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 ABCB6Q9NP58 842 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 TDRD15B5MCY1 1934 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 ARL5CA6NH57 179 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 SCNN1GP51170 649 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 TMEM176AQ96HP8 235 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 CYTH4Q9UIA0 394 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 BARX2Q9UMQ3 279 aaPredicted RBP11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 GJB6O95452 261 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 CD4P01730 458 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 HSPA6P17066 643 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 CDK7P50613 346 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 HADHBP55084 474 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 TCEAL1Q15170 157 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 SOWAHAQ2M3V2 549 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 RSRC2Q7L4I2 434 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 DPH6Q7L8W6 267 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 CEP112Q8N8E3 955 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 NOA1Q8NC60 698 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 EFCAB8A8MWE9 144 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 MTA2O94776 668 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 PAEPP09466 180 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 CYP3A5P20815 502 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 MRPL10Q7Z7H8 261 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 PHF13Q86YI8 300 aaPredicted RBP11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 FAM126BQ8IXS8 530 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 C12orf29Q8N999 325 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 LINC01599Q8WXQ3 324 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 LPIN3Q9BQK8 851 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 ADAM22Q9P0K1 906 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 TJP2Q9UDY2 1190 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 PCDHGC3Q9UN70 934 aa11.63□□□□□ -0.55
PDXDC1-216ENST00000569715 TET1Q8NFU7 2136 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 PRLRP16471 622 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 TCP1P17987 556 aaKnown RBP11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 MESDQ14696 234 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 RPS6KA1Q15418 735 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 CAGE1Q8TC20 777 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 SCN5AQ14524 2016 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 A0A0U1RQF3 1178 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 KPNA7A9QM74 516 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 CAND2O75155 1236 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 FGFR1P11362 822 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 RTN4RL1Q86UN2 441 aaPredicted RBP11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 SYCE1Q8N0S2 351 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 KBTBD7Q8WVZ9 684 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 HEXIM2Q96MH2 286 aaKnown RBP11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 RPS6KC1Q96S38 1066 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 PAAF1Q9BRP4 392 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 DPEP3Q9H4B8 488 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 OGDHLQ9ULD0 1010 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 CTAGE15A4D2H0 777 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 KCNK3O14649 394 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 XPOTO43592 962 aaKnown RBP11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 CTAGE8P0CG41 777 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 MMP8P22894 467 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 CTAGE6Q86UF2 777 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 CTAGE4Q8IX94 777 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 HES6Q96HZ4 224 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 TRAIPQ9BWF2 469 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 L1RE1Q9UN81 338 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 ALG6Q9Y672 507 aa11.62□□□□□ -0.55
PDXDC1-216ENST00000569715 ZNF623O75123 536 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 MICAL2O94851 1124 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 LSM8O95777 96 aaKnown RBP11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 LRPAP1P30533 357 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 CDH5P33151 784 aaPredicted RBP11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 MARCKSL1P49006 195 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 TAF6P49848 677 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 ATN1P54259 1190 aaPredicted RBP11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 LILRA4P59901 499 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 RNASE9P60153 205 aaKnown RBP11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 CYP4A22Q5TCH4 519 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 C11orf63Q6NUN7 778 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 ACOT1Q86TX2 421 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 C3orf58Q8NDZ4 430 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 UBXN4Q92575 508 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 ZNF560Q96MR9 790 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 NT5C1AQ9BXI3 368 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 AVENQ9NQS1 362 aaPredicted RBP11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 UVRAGQ9P2Y5 699 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 ANAPC7Q9UJX3 599 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 AMFRQ9UKV5 643 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 GIT1Q9Y2X7 761 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 CASTOR2A6NHX0 329 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 O00370 1275 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 PQBP1O60828 265 aaKnown RBP11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 POMCP01189 267 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 CLCNKBP51801 687 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 C2orf54Q08AI8 447 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 GPNMBQ14956 572 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 PTPN20Q4JDL3 420 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms