RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ALLCQ8N6M5 410 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 FEZF2Q8TBJ5 459 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 ASAP3Q8TDY4 903 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 ZNF483Q8TF39 744 aaPredicted RBP14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 SENP7Q9BQF6 1050 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 ALOX15BO15296 676 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 PIAS1O75925 651 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 FGFR1P11362 822 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 TCF4P15884 667 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 CTCFP49711 727 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 MCCD1P59942 119 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 NOMO3P69849 1222 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 MAPK6Q16659 721 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 ABRAQ8N0Z2 381 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 ENDOVQ8N8Q3 282 aaKnown RBP14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 DNAJC9Q8WXX5 260 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 SLITRK1Q96PX8 696 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 IP6K2Q9UHH9 426 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 SLC24A2Q9UI40 661 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 SLX4Q8IY92 1834 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 DPPA5A6NC42 116 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 C2CD2LO14523 706 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 ATP9AO75110 1047 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 ZWINTO95229 277 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 ATP4AP20648 1035 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 ADRA1DP25100 572 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 TRIM72Q6ZMU5 477 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 ACSF2Q96CM8 615 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 CEP170P1Q96L14 293 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 TMEM121Q9BTD3 319 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 DCLRE1BQ9H816 532 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 ANKEF1Q9NU02 776 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 PARVAQ9NVD7 372 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 ANKFY1Q9P2R3 1169 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 A0A0G2JND7 137 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 LRRD1A4D1F6 860 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 WDR64B1ANS9 1081 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 GOLGA8RI6L899 631 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 ICAM1P05362 532 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 GEMIN4P57678 1058 aaKnown RBP14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 RPL7AP62424 266 aaKnown RBP14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 PLEKHA7Q6IQ23 1121 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 APBB1IPQ7Z5R6 666 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 CLNKQ7Z7G1 428 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 NLRX1Q86UT6 975 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 MASTLQ96GX5 879 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 GLIS2Q9BZE0 524 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 NRXN2Q9P2S2 1712 aa14.73□□□□□ -0.05
VPS9D1-202ENST00000561976 UBR3Q6ZT12 1888 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 CFAP69A5D8W1 941 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 TRAFD1O14545 582 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 LMNAP02545 664 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 JAK3P52333 1124 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 MRPS35P82673 323 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 MXRA7P84157 204 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 EFTUD2Q15029 972 aaKnown RBP eCLIP14.72□□□□□ -0.056e-7■■■■■ 34.6
VPS9D1-202ENST00000561976 HIF1AQ16665 826 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 ANO5Q75V66 913 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 PYROXD1Q8WU10 500 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 KLF6Q99612 283 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 ALG13Q9NP73 1137 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 SAR1AQ9NR31 198 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 IVNS1ABPQ9Y6Y0 642 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 ZNF536O15090 1300 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 TESPA1A2RU30 521 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 KIF3CO14782 793 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 CCNE2O96020 404 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 NEFHP12036 1026 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 SSTR1P30872 391 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 PHBP35232 272 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 TFDP1Q14186 410 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 PLEKHG4Q58EX7 1191 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 RNASEH2BQ5TBB1 312 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 RFWD3Q6PCD5 774 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 MCF2L2Q86YR7 1114 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 TAB3Q8N5C8 712 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 RFWD2Q8NHY2 731 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 VCPIP1Q96JH7 1222 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 TAAR1Q96RJ0 339 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 LBHD1Q9BQE6 289 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 C12orf65Q9H3J6 166 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 PPCSQ9HAB8 311 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 CYLDQ9NQC7 956 aa14.72□□□□□ -0.05
VPS9D1-202ENST00000561976 GARTP22102 1010 aa14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 CAP2P40123 477 aa14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 LIG4P49917 911 aa14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 VCPP55072 806 aaKnown RBP14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 ZBTB16Q05516 673 aa14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 MTM1Q13496 603 aa14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 CUL2Q13617 745 aa14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 KHDC1Q4VXA5 237 aaKnown RBP14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 TDRD10Q5VZ19 366 aaKnown RBP14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 SPOCD1Q6ZMY3 1216 aa14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 PHF13Q86YI8 300 aaPredicted RBP14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 RBBP8NLQ8NC74 664 aaPredicted RBP14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 TCP10LQ8TDR4 215 aa14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 STOML1Q9UBI4 398 aa14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 LNPEPQ9UIQ6 1025 aa14.71□□□□□ -0.05
VPS9D1-202ENST00000561976 SHOC2Q9UQ13 582 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms