RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 GFOD2Q3B7J2 385 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 RD3Q7Z3Z2 195 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 PPP1R32Q7Z5V6 425 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 CFAP52Q8N1V2 620 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 PDPRQ8NCN5 879 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 POC1BQ8TC44 478 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 BRIX1Q8TDN6 353 aaKnown RBP5.62□□□□□ -1.51
PSMA4-221ENST00000560842 DDX17Q92841 729 aaKnown RBP5.62□□□□□ -1.51
PSMA4-221ENST00000560842 MTFMTQ96DP5 389 aaKnown RBP5.62□□□□□ -1.51
PSMA4-221ENST00000560842 LRIG1Q96JA1 1093 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 R3HDMLQ9H3Y0 253 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 PRDM13Q9H4Q3 707 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 GALNT9Q9HCQ5 603 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 RNF181Q9P0P0 153 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 CHPF2Q9P2E5 772 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 L1RE1Q9UN81 338 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 MAP3K2Q9Y2U5 619 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 PCDHA1Q9Y5I3 950 aa5.62□□□□□ -1.51
PSMA4-221ENST00000560842 PIPSLA2A3N6 862 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 A6NNZ2 444 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 FAM227AF5H4B4 570 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 AHSGP02765 367 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 EGR2P11161 476 aaPredicted RBP5.61□□□□□ -1.51
PSMA4-221ENST00000560842 KCNA2P16389 499 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 FDXRP22570 491 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 ZEB1P37275 1124 aaPredicted RBP5.61□□□□□ -1.51
PSMA4-221ENST00000560842 ARFIP2P53365 341 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 MXRA7P84157 204 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 GUCY1B3Q02153 619 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 SPDYE7PQ495Y7 208 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 SP5Q6BEB4 398 aaPredicted RBP5.61□□□□□ -1.51
PSMA4-221ENST00000560842 FOXR2Q6PJQ5 311 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 NPNTQ6UXI9 565 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 C14orf80Q86SX3 495 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 DAAM2Q86T65 1068 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 SH2D3CQ8N5H7 860 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 SLC17A8Q8NDX2 589 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 B3GNT5Q9BYG0 378 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 ALOXE3Q9BYJ1 711 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 SERHL2Q9H4I8 314 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.61□□□□□ -1.51
PSMA4-221ENST00000560842 SYBUQ9NX95 663 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 OBP2AQ9NY56 170 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 ETAA1Q9NY74 926 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 MED16Q9Y2X0 877 aa5.61□□□□□ -1.51
PSMA4-221ENST00000560842 PRAMEF33A0A0G2JMD5 474 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 PRAMEF10O60809 474 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 SUN1O94901 812 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 FOSP01100 380 aaPredicted RBP5.6□□□□□ -1.51
PSMA4-221ENST00000560842 VAV2P52735 878 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 USP14P54578 494 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 BLOC1S1P78537 153 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 PIGFQ07326 219 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 ZNF844Q08AG5 666 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 TP53BP2Q13625 1128 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 CCDC157Q569K6 752 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 ABHD17BQ5VST6 288 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 Q6YL49 198 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 MAEAQ7L5Y9 396 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 SRGAP1Q7Z6B7 1085 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 TNPO1Q92973 898 aaKnown RBP5.6□□□□□ -1.51
PSMA4-221ENST00000560842 C8orf48Q96LL4 319 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 IMPG2Q9BZV3 1241 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 SIK2Q9H0K1 926 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 UNKLQ9H9P5 680 aaKnown RBP5.6□□□□□ -1.51
PSMA4-221ENST00000560842 RSAD1Q9HA92 442 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 ATP6V0A4Q9HBG4 840 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 DDX20Q9UHI6 824 aaKnown RBP5.6□□□□□ -1.51
PSMA4-221ENST00000560842 AGAP1Q9UPQ3 857 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 NOX1Q9Y5S8 564 aa5.6□□□□□ -1.51
PSMA4-221ENST00000560842 SPATA31A3Q5VYP0 1347 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 CCDC195A0A1B0GUA6 201 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 VSTM5A8MXK1 200 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 FRS3O43559 492 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 DNAJB5O75953 348 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 HDCP19113 662 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 TOB1P50616 345 aaPredicted RBP5.59□□□□□ -1.51
PSMA4-221ENST00000560842 ANXA11P50995 505 aaKnown RBP5.59□□□□□ -1.51
PSMA4-221ENST00000560842 SOX8P57073 446 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 PSMC1P62191 440 aaKnown RBP5.59□□□□□ -1.51
PSMA4-221ENST00000560842 GALEQ14376 348 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 ARHGAP29Q52LW3 1261 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 KHDC1LQ5JSQ8 128 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 ZNF362Q5T0B9 420 aaPredicted RBP5.59□□□□□ -1.51
PSMA4-221ENST00000560842 SWSAP1Q6NVH7 229 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 FBXO42Q6P3S6 717 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 CLNKQ7Z7G1 428 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 GPR149Q86SP6 731 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 USP37Q86T82 979 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 LINC00476Q8WZB0 136 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 ANKS1AQ92625 1134 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 COQ10AQ96MF6 247 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 CNPPD1Q9BV87 410 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 DPH1Q9BZG8 443 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 TINAGL1Q9GZM7 467 aaPredicted RBP5.59□□□□□ -1.51
PSMA4-221ENST00000560842 SARS2Q9NP81 518 aaKnown RBP5.59□□□□□ -1.51
PSMA4-221ENST00000560842 PRDM11Q9NQV5 511 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 CDYLQ9Y232 598 aa5.59□□□□□ -1.51
PSMA4-221ENST00000560842 COL11A2P13942 1736 aaPredicted RBP5.58□□□□□ -1.52
PSMA4-221ENST00000560842 CAPN8A6NHC0 703 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms