RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 GUCY1A2P33402 732 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 APBA1Q02410 837 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 MTM1Q13496 603 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 KHDC1LQ5JSQ8 128 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 MICALCLQ6ZW33 695 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 GDF7Q7Z4P5 450 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 BOLLQ8N9W6 283 aaKnown RBP6.59□□□□□ -1.35
VRK1-205ENST00000555402 VPS37AQ8NEZ2 397 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 CASKIN2Q8WXE0 1202 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 CCDC138Q96M89 665 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 DCLRE1CQ96SD1 692 aaKnown RBP6.59□□□□□ -1.35
VRK1-205ENST00000555402 WDCPQ9H6R7 721 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 KIAA1586Q9HCI6 787 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 PCDHA6Q9UN73 950 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 DMTF1Q9Y222 760 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 FRMD4BQ9Y2L6 1034 aa6.59□□□□□ -1.35
VRK1-205ENST00000555402 TEX33O43247 280 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 NDUFA10O95299 355 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 FTH1P19P0C7X4 201 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 HKR1P10072 659 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 MYF5P13349 255 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 SERPINB3P29508 390 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 SLC7A1P30825 629 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 CXCR5P32302 372 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 ALDH5A1P51649 535 aaPredicted RBP6.58□□□□□ -1.36
VRK1-205ENST00000555402 CTXN1P60606 82 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 C1orf228Q6PIY5 440 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 TOGARAM2Q6ZUX3 1019 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 ZNF572Q7Z3I7 529 aaPredicted RBP6.58□□□□□ -1.36
VRK1-205ENST00000555402 SKAP1Q86WV1 359 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 KRT78Q8N1N4 520 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 BRIX1Q8TDN6 353 aaKnown RBP6.58□□□□□ -1.36
VRK1-205ENST00000555402 ATP6V0A4Q9HBG4 840 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 OGDHLQ9ULD0 1010 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 CORO2BQ9UQ03 480 aa6.58□□□□□ -1.36
VRK1-205ENST00000555402 ZMYM3Q14202 1370 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 GAGE12BA1L429 117 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 GAGE12HA6NDE8 117 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 ZKSCAN1P17029 563 aaPredicted RBP6.57□□□□□ -1.36
VRK1-205ENST00000555402 BMPR1AP36894 532 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 PIK3CBP42338 1070 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 ALDH1A3P47895 512 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 GZMKP49863 264 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 ATP8B2P98198 1209 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 SP140Q13342 867 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 LCE1AQ5T7P2 110 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 AFMIDQ63HM1 303 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 SP5Q6BEB4 398 aaPredicted RBP6.57□□□□□ -1.36
VRK1-205ENST00000555402 IL31RAQ8NI17 732 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 TNPO1Q92973 898 aaKnown RBP6.57□□□□□ -1.36
VRK1-205ENST00000555402 IL17RAQ96F46 866 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 APIPQ96GX9 242 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 SPATA5L1Q9BVQ7 753 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 LSM14BQ9BX40 385 aaKnown RBP6.57□□□□□ -1.36
VRK1-205ENST00000555402 ZNF287Q9HBT7 754 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 SLAMF7Q9NQ25 335 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 PLCB1Q9NQ66 1216 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 GNL3LQ9NVN8 582 aaKnown RBP6.57□□□□□ -1.36
VRK1-205ENST00000555402 CHST2Q9Y4C5 530 aa6.57□□□□□ -1.36
VRK1-205ENST00000555402 PIPSLA2A3N6 862 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 F2RL2O00254 374 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 KPNA5O15131 536 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 FRS3O43559 492 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 C1RP00736 705 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 CD1AP06126 327 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 BRAFP15056 766 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 PRDX5P30044 214 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 PLA2G5P39877 138 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 PRIM2P49643 509 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 BEAN1Q3B7T3 259 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 FAM47AQ5JRC9 791 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 XRRA1Q6P2D8 792 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 TSHZ1Q6ZSZ6 1077 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 PPP1R3BQ86XI6 285 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 ENAHQ8N8S7 591 aaPredicted RBP6.56□□□□□ -1.36
VRK1-205ENST00000555402 PHKBQ93100 1093 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 C1orf43Q9BWL3 253 aa6.56□□□□□ -1.36
VRK1-205ENST00000555402 C11orf54Q9H0W9 315 aaPredicted RBP6.56□□□□□ -1.36
VRK1-205ENST00000555402 PIH1D1Q9NWS0 290 aaKnown RBP6.56□□□□□ -1.36
VRK1-205ENST00000555402 USP19O94966 1318 aa6.55□□□□□ -1.36
VRK1-205ENST00000555402 LEFTY2O00292 366 aa6.55□□□□□ -1.36
VRK1-205ENST00000555402 IFRD1O00458 451 aaPredicted RBP6.55□□□□□ -1.36
VRK1-205ENST00000555402 KIAA0391O15091 583 aaKnown RBP6.55□□□□□ -1.36
VRK1-205ENST00000555402 SETSIPP0DME0 302 aa6.55□□□□□ -1.36
VRK1-205ENST00000555402 ALOX15P16050 662 aaPredicted RBP6.55□□□□□ -1.36
VRK1-205ENST00000555402 RPL17P18621 184 aaKnown RBP6.55□□□□□ -1.36
VRK1-205ENST00000555402 TM4SF4P48230 202 aa6.55□□□□□ -1.36
VRK1-205ENST00000555402 FLT3LGP49771 235 aa6.55□□□□□ -1.36
VRK1-205ENST00000555402 MFSD14BQ5SR56 506 aa6.55□□□□□ -1.36
VRK1-205ENST00000555402 PLXDC1Q8IUK5 500 aa6.55□□□□□ -1.36
VRK1-205ENST00000555402 CELF5Q8N6W0 485 aaKnown RBP6.55□□□□□ -1.36
VRK1-205ENST00000555402 DCBLD1Q8N8Z6 715 aa6.55□□□□□ -1.36
VRK1-205ENST00000555402 CEP95Q96GE4 821 aa6.55□□□□□ -1.36
VRK1-205ENST00000555402 BTBD1Q9H0C5 482 aa6.55□□□□□ -1.36
VRK1-205ENST00000555402 MRPL46Q9H2W6 279 aaKnown RBP6.55□□□□□ -1.36
VRK1-205ENST00000555402 ALG13Q9NP73 1137 aaKnown RBP6.55□□□□□ -1.36
VRK1-205ENST00000555402 FNIP2Q9P278 1114 aa6.55□□□□□ -1.36
VRK1-205ENST00000555402 HDAC5Q9UQL6 1122 aa6.55□□□□□ -1.36
VRK1-205ENST00000555402 MYADML2A6NDP7 307 aa6.54□□□□□ -1.36
VRK1-205ENST00000555402 NT5C1B-RDH14C9J2C7 533 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms