RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 GRM2Q14416 872 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 SV2CQ496J9 727 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 SLC39A12Q504Y0 691 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 VITQ6UXI7 678 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 DNAJB7Q7Z6W7 309 aaPredicted RBP15.53■□□□□ 0.08
COL2A1-209ENST00000546974 ITIH5Q86UX2 942 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 MFSD6LQ8IWD5 586 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 CCDC65Q8IXS2 484 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 SYCP3Q8IZU3 236 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 PDILTQ8N807 584 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 ZSCAN18Q8TBC5 510 aaPredicted RBP15.53■□□□□ 0.08
COL2A1-209ENST00000546974 SNX21Q969T3 373 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 PSMG2Q969U7 264 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 ZNF396Q96N95 335 aaPredicted RBP15.53■□□□□ 0.08
COL2A1-209ENST00000546974 PYM1Q9BRP8 204 aaKnown RBP15.53■□□□□ 0.08
COL2A1-209ENST00000546974 LRRC27Q9C0I9 530 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 ZCWPW1Q9H0M4 648 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 TMEM206Q9H813 350 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 HEBP1Q9NRV9 189 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 MRPS17Q9Y2R5 130 aaKnown RBP15.53■□□□□ 0.08
COL2A1-209ENST00000546974 TICRRQ7Z2Z1 1910 aa15.53■□□□□ 0.08
COL2A1-209ENST00000546974 SPTBN4Q9H254 2564 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 EP300Q09472 2414 aaPredicted RBP15.52■□□□□ 0.08
COL2A1-209ENST00000546974 A0A1W2PRU2 124 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 KPNA7A9QM74 516 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 MAN2B1O00754 1011 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 FGF19O95750 216 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 TARSP26639 723 aaKnown RBP15.52■□□□□ 0.08
COL2A1-209ENST00000546974 PNPLA4P41247 253 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 WSCD1Q658N2 575 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 ZC3H14Q6PJT7 736 aaKnown RBP15.52■□□□□ 0.08
COL2A1-209ENST00000546974 MAML2Q8IZL2 1156 aaPredicted RBP15.52■□□□□ 0.08
COL2A1-209ENST00000546974 TTC9BQ8N6N2 239 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 ZSWIM2Q8NEG5 633 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 C2orf15Q8WU43 125 aaKnown RBP15.52■□□□□ 0.08
COL2A1-209ENST00000546974 CACTINQ8WUQ7 758 aaKnown RBP15.52■□□□□ 0.08
COL2A1-209ENST00000546974 CLDN23Q96B33 292 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 SAAL1Q96ER3 474 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 ZNF560Q96MR9 790 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 TNMDQ9H2S6 317 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 CUEDC2Q9H467 287 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 SLITRK6Q9H5Y7 841 aa15.52■□□□□ 0.08
COL2A1-209ENST00000546974 ZNF334Q9HCZ1 680 aaPredicted RBP15.52■□□□□ 0.08
COL2A1-209ENST00000546974 NUP210Q8TEM1 1887 aaPredicted RBP15.52■□□□□ 0.07
COL2A1-209ENST00000546974 GVINP1Q7Z2Y8 2422 aa15.52■□□□□ 0.07
COL2A1-209ENST00000546974 ZNF292O60281 2723 aa15.52■□□□□ 0.07
COL2A1-209ENST00000546974 COL4A2P08572 1712 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 DENND4CQ5VZ89 1909 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 SHISA7A6NL88 538 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 HEPACAM2A8MVW5 462 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 KIAA0391O15091 583 aaKnown RBP15.51■□□□□ 0.07
COL2A1-209ENST00000546974 EXTL3O43909 919 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 PRPF6O94906 941 aaKnown RBP15.51■□□□□ 0.07
COL2A1-209ENST00000546974 YEATS4O95619 227 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 PDIA4P13667 645 aaKnown RBP15.51■□□□□ 0.07
COL2A1-209ENST00000546974 GDI1P31150 447 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 VIPR2P41587 438 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 RPS9P46781 194 aaKnown RBP15.51■□□□□ 0.07
COL2A1-209ENST00000546974 WNT7BP56706 349 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 TFAMQ00059 246 aaKnown RBP15.51■□□□□ 0.07
COL2A1-209ENST00000546974 E2F4Q16254 413 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 ZNF528Q3MIS6 628 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 GAREM2Q75VX8 874 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 ADSSL1Q8N142 457 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 SPPL2BQ8TCT7 592 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 FGFBP2Q9BYJ0 223 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 KBTBD4Q9NVX7 518 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 SPATA6Q9NWH7 488 aaPredicted RBP15.51■□□□□ 0.07
COL2A1-209ENST00000546974 RBAKQ9NYW8 714 aaPredicted RBP15.51■□□□□ 0.07
COL2A1-209ENST00000546974 TFIP11Q9UBB9 837 aaKnown RBP15.51■□□□□ 0.07
COL2A1-209ENST00000546974 FBXO4Q9UKT5 387 aa15.51■□□□□ 0.07
COL2A1-209ENST00000546974 ZNF263O14978 683 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 LAMTOR5O43504 91 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 CUTAO60888 179 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 SOAT2O75908 522 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 LMNAP02545 664 aaKnown RBP15.5■□□□□ 0.07
COL2A1-209ENST00000546974 ITGB3P05106 788 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 GABRR2P28476 465 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 AMPD3Q01432 767 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 FZD5Q13467 585 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 VEPH1Q14D04 833 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 MGAT5BQ3V5L5 792 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 STXBP4Q6ZWJ1 553 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 LRRTM3Q86VH5 581 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 DCP1BQ8IZD4 617 aaKnown RBP15.5■□□□□ 0.07
COL2A1-209ENST00000546974 C1orf127Q8N9H9 656 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 SEPT5Q99719 369 aaPredicted RBP15.5■□□□□ 0.07
COL2A1-209ENST00000546974 CBWD1Q9BRT8 395 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 ATXN3LQ9H3M9 355 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 PCIF1Q9H4Z3 704 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 AGAP1Q9UPQ3 857 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 R4GN57 208 aa15.5■□□□□ 0.07
COL2A1-209ENST00000546974 DCHS1Q96JQ0 3298 aa15.49■□□□□ 0.07
COL2A1-209ENST00000546974 ZNF638Q14966 1978 aaKnown RBP15.49■□□□□ 0.07
COL2A1-209ENST00000546974 NCANO14594 1321 aa15.49■□□□□ 0.07
COL2A1-209ENST00000546974 GOLGA8IPA6NC78 632 aa15.49■□□□□ 0.07
COL2A1-209ENST00000546974 GOLGA8JA6NMD2 632 aa15.49■□□□□ 0.07
COL2A1-209ENST00000546974 ATF6P18850 670 aa15.49■□□□□ 0.07
COL2A1-209ENST00000546974 WEE1P30291 646 aa15.49■□□□□ 0.07
COL2A1-209ENST00000546974 POLR2BP30876 1174 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms