RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 SH2D4BQ5SQS7 431 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 ELMO3Q96BJ8 720 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 DDX27Q96GQ7 796 aaKnown RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 NSL1Q96IY1 281 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 ACAP3Q96P50 834 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 TMEM121Q9BTD3 319 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 HEY2Q9UBP5 337 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 MID2Q9UJV3 735 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 BCL9LQ86UU0 1499 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 ENO4A6NNW6 628 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 POLRMTO00411 1230 aaKnown RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 KIF3CO14782 793 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 SPAG6O75602 509 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 PRKCBP05771 671 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 SNRPAP09012 282 aaKnown RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 BRD2P25440 801 aaKnown RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 TYK2P29597 1187 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 STIP1P31948 543 aaKnown RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 ART3Q13508 389 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 SLC35G1Q2M3R5 365 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 EXOC3L1Q86VI1 746 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 FAM71AQ8IYT1 594 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 CERS5Q8N5B7 392 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 NIF3L1Q9GZT8 377 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 NEUROG2Q9H2A3 272 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 DHX35Q9H5Z1 703 aaKnown RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 NINJ2Q9NZG7 142 aa8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 MARCOQ9UEW3 520 aaPredicted RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 SCAF8Q9UPN6 1271 aaKnown RBP8.62□□□□□ -1.03
PRKAB1-207ENST00000542698 TMEM150BA6NC51 233 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 MX2P20592 715 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 MMP13P45452 471 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 COG7P83436 770 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 TNFAIP2Q03169 654 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 MCL1Q07820 350 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 PRPSAP1Q14558 356 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 RRP1BQ14684 758 aaKnown RBP8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 FSCBQ5H9T9 825 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 PCNX4Q63HM2 1172 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 SPOPLQ6IQ16 392 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 LRRC6Q86X45 466 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 SULF1Q8IWU6 871 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 ABRAQ8N0Z2 381 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 TEX9Q8N6V9 391 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 FAM71DQ8N9W8 422 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 RSAD1Q9HA92 442 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 AGO4Q9HCK5 861 aaKnown RBP8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 CLEC11AQ9Y240 323 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 ACTR2P61160 394 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 MRPS35P82673 323 aaKnown RBP8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 STX3Q13277 289 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 PREPLQ4J6C6 727 aaPredicted RBP8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 SEZ6Q53EL9 994 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 EAPPQ56P03 285 aaPredicted RBP8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 CYP4A22Q5TCH4 519 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 CEP120Q8N960 986 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 GSDMBQ8TAX9 411 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 SYTL5Q8TDW5 730 aaPredicted RBP8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 SLC26A7Q8TE54 656 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 PPWD1Q96BP3 646 aaKnown RBP8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 CCDC124Q96CT7 223 aaKnown RBP8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 GPRASP2Q96D09 838 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 CENPKQ9BS16 269 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 THTPAQ9BU02 230 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 LRRC19Q9H756 370 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 DCLRE1BQ9H816 532 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 CYP4F11Q9HBI6 524 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 AVENQ9NQS1 362 aaPredicted RBP8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 SLC24A2Q9UI40 661 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 ABCC6O95255 1503 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 GOLGA8QA0A0J9YX86 632 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 GOLGA8OA6NCC3 632 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 DCDC2CA8MYV0 355 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 GOLGA8NF8WBI6 632 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 PIK3CDO00329 1044 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 GSTA2P09210 222 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 OSBPP22059 807 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 PHKA2P46019 1235 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 ALDH5A1P51649 535 aaPredicted RBP8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 SLC15A2Q16348 729 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 KCNT1Q5JUK3 1230 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 RABGAP1LQ5R372 815 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 ACTL9Q8TC94 416 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 CKAP2Q8WWK9 683 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 SEPT1Q8WYJ6 367 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 SHC3Q92529 594 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 ATG4CQ96DT6 458 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 VCPIP1Q96JH7 1222 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 LRGUKQ96M69 825 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 FAM111AQ96PZ2 611 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 PDCD2LQ9BRP1 358 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 ERVK-5Q9HDB9 667 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 MAP3K20Q9NYL2 800 aaKnown RBP8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 PAK5Q9P286 719 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 CTNNAL1Q9UBT7 734 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 ZNRF3Q9ULT6 936 aa8.61□□□□□ -1.03
PRKAB1-207ENST00000542698 MYH8P13535 1937 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 PIK3R2O00459 728 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 APOL1O14791 398 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 ALDH18A1P54886 795 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms