RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 LLGL2Q6P1M3 1020 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 LIMS2Q7Z4I7 341 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 ADGRF2Q8IZF7 708 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 EHBP1Q8NDI1 1231 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 ANKRD20A12PQ8NF67 263 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 SPATA18Q8TC71 538 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 SNX25Q9H3E2 840 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 CLDND1Q9NY35 253 aa16.61■□□□□ 0.25
DDB1-218ENST00000540784 LINC01565O15544 149 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 LRRN2O75325 713 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 TACC1O75410 805 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 GLUD1P00367 558 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 TPM2P07951 284 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 SPATA31D3P0C874 917 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 SRGAP2BP0DMP2 458 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 CTC1Q2NKJ3 1217 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 LILRA6Q6PI73 481 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 TMEM184AQ6ZMB5 413 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 SPATA31D4Q6ZUB0 917 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 DHX40Q8IX18 779 aaKnown RBP16.6■□□□□ 0.25
DDB1-218ENST00000540784 PABPC5Q96DU9 382 aaKnown RBP16.6■□□□□ 0.25
DDB1-218ENST00000540784 NDST4Q9H3R1 872 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 DDX43Q9NXZ2 648 aaKnown RBP16.6■□□□□ 0.25
DDB1-218ENST00000540784 DPP7Q9UHL4 492 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 HCFC2Q9Y5Z7 792 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 CDH23Q9H251 3354 aa16.6■□□□□ 0.25
DDB1-218ENST00000540784 PRRC2BQ5JSZ5 2229 aaKnown RBP16.6■□□□□ 0.25
DDB1-218ENST00000540784 SCN1AP35498 2009 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 PES1O00541 588 aaKnown RBP16.59■□□□□ 0.25
DDB1-218ENST00000540784 GABRDO14764 452 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 TGM5O43548 720 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 EPCAMP16422 314 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 WARSP23381 471 aaKnown RBP16.59■□□□□ 0.25
DDB1-218ENST00000540784 CDH8P55286 799 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 NOP14P78316 857 aaKnown RBP16.59■□□□□ 0.25
DDB1-218ENST00000540784 KCNC3Q14003 757 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 IQCB1Q15051 598 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 ELMSAN1Q6PJG2 1045 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 LRSAM1Q6UWE0 723 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 OR6B3Q8NGW1 331 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 ZNF461Q8TAF7 563 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 CASP10Q92851 521 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 TATDN2Q93075 761 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 HLA-CQ95604 372 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 FAXDC2Q96IV6 333 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 RTP3Q9BQQ7 232 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 ACBD6Q9BR61 282 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 MRPL45Q9BRJ2 306 aaKnown RBP16.59■□□□□ 0.25
DDB1-218ENST00000540784 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 CYP3A43Q9HB55 503 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 APOBEC3GQ9HC16 384 aaKnown RBP16.59■□□□□ 0.25
DDB1-218ENST00000540784 CBX8Q9HC52 389 aa16.59■□□□□ 0.25
DDB1-218ENST00000540784 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.58■□□□□ 0.24
DDB1-218ENST00000540784 ABLIM3O94929 683 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 PDGFRBP09619 1106 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 WEE2P0C1S8 567 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 CPB1P15086 417 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 LMO2P25791 158 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 PCSK1P29120 753 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 ELF1P32519 619 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 TPM4P67936 248 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 RBM10P98175 930 aaKnown RBP16.58■□□□□ 0.24
DDB1-218ENST00000540784 TSPY1Q01534 308 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 ROR1Q01973 937 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 LRMPQ12912 555 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 GPR17Q13304 367 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 COL19A1Q14993 1142 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 KRT31Q15323 416 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 TPGS2Q68CL5 300 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 SCARA5Q6ZMJ2 495 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 GBP6Q6ZN66 633 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 OSTM1Q86WC4 334 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 DCP1BQ8IZD4 617 aaKnown RBP16.58■□□□□ 0.24
DDB1-218ENST00000540784 VN1R2Q8NFZ6 395 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 OR10T2Q8NGX3 314 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 HDAC7Q8WUI4 952 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 KBTBD7Q8WVZ9 684 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 NIF3L1Q9GZT8 377 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 ZCWPW1Q9H0M4 648 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 VPS16Q9H269 839 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 PLEKHA4Q9H4M7 779 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 SMYD3Q9H7B4 428 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 TAB2Q9NYJ8 693 aa16.58■□□□□ 0.24
DDB1-218ENST00000540784 LIMA1Q9UHB6 759 aaKnown RBP16.58■□□□□ 0.24
DDB1-218ENST00000540784 MYO7AQ13402 2215 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 LRRC10BA6NIK2 292 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 A8MXQ7 604 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 OR4Q2P0C623 313 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 ZNF18P17022 549 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 ACAT1P24752 427 aaKnown RBP16.57■□□□□ 0.24
DDB1-218ENST00000540784 ASPAP45381 313 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 RAP1GAPP47736 663 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 MIIPQ5JXC2 388 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 KREMEN2Q8NCW0 462 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 LMO3Q8TAP4 145 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 NT5C1BQ96P26 610 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 TMEM209Q96SK2 561 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 CRACR2AQ9BSW2 395 aa16.57■□□□□ 0.24
DDB1-218ENST00000540784 INTS2Q9H0H0 1204 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms