RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 RBM15Q96T37 977 aaKnown RBP eCLIP9.21□□□□□ -0.94
UBE3B-208ENST00000538070 KLF6Q99612 283 aaPredicted RBP9.21□□□□□ -0.94
UBE3B-208ENST00000538070 ACO2Q99798 780 aaKnown RBP9.21□□□□□ -0.94
UBE3B-208ENST00000538070 METTL5Q9NRN9 209 aaKnown RBP9.21□□□□□ -0.94
UBE3B-208ENST00000538070 PCYOX1Q9UHG3 505 aa9.21□□□□□ -0.94
UBE3B-208ENST00000538070 POLR2AP24928 1970 aaKnown RBP9.21□□□□□ -0.94
UBE3B-208ENST00000538070 GOLGA8RI6L899 631 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 KRT3P12035 628 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 NEFHP12036 1026 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 POLR2BP30876 1174 aaKnown RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 OGDHQ02218 1023 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 SIX1Q15475 284 aaPredicted RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 KIZQ2M2Z5 673 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 C6orf118Q5T5N4 469 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 NUGGCQ68CJ6 796 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 DPP9Q86TI2 863 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 RIOX2Q8IUF8 465 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 TEX2Q8IWB9 1127 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 BRSK2Q8IWQ3 736 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 ZBED8Q8IZ13 594 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 C4orf33Q8N1A6 199 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 NETO2Q8NC67 525 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 MPHOSPH6Q99547 160 aaKnown RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 GPR20Q99678 358 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 MIS12Q9H081 205 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 GINM1Q9NU53 330 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 GPATCH2LQ9NWQ4 482 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 A0A087WUV0 522 aaPredicted RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 LACTBL1A8MY62 500 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 FSCN2O14926 492 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 MEFVO15553 781 aaPredicted RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 MSCO60682 206 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 MAFO75444 373 aaPredicted RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 GH1P01241 217 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 BRAFP15056 766 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 RFC5P40937 340 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 ADCYAP1R1P41586 468 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 GCLCP48506 637 aaPredicted RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 BASP1P80723 227 aaKnown RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 CENPCQ03188 943 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 BYSLQ13895 437 aaKnown RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 FASTKD3Q14CZ7 662 aaKnown RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 FAM102AQ5T9C2 384 aaPredicted RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 IER5Q5VY09 327 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 CCDC89Q8N998 374 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 KCTD6Q8NC69 237 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 GRK7Q8WTQ7 553 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 SLC10A4Q96EP9 437 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 C12orf42Q96LP6 360 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 LPIN3Q9BQK8 851 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 EPB41L4BQ9H329 900 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 ALG13Q9NP73 1137 aaKnown RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 NGRNQ9NPE2 291 aaKnown RBP9.2□□□□□ -0.94
UBE3B-208ENST00000538070 SAMD15Q9P1V8 674 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 RBPJLQ9UBG7 517 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 CNTNAP2Q9UHC6 1331 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 SCINQ9Y6U3 715 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 TMEM120BA0PK00 339 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 TCP11X1B4DZS4 312 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 TULP2O00295 520 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 CD48P09326 243 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 RARGP13631 454 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 CLUL1Q15846 466 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 SGSM1Q2NKQ1 1148 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 BBS9Q3SYG4 887 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 AGBL2Q5U5Z8 902 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 C9orf131Q5VYM1 1079 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 JADE1Q6IE81 842 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 C12orf29Q8N999 325 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 CDCA5Q96FF9 252 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 FGFR1OP2Q9NVK5 253 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 IP6K2Q9UHH9 426 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 ADAMTS5Q9UNA0 930 aa9.2□□□□□ -0.94
UBE3B-208ENST00000538070 KIAA1217Q5T5P2 1943 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 EXOC1LA0A1B0GW35 172 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 GPR25O00155 361 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 CST8O60676 142 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 IQCF3P0C7M6 154 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 STAG3L1P0CL83 205 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 STX2P32856 288 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 FNTAP49354 379 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 EFNA5P52803 228 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 YARSP54577 528 aaKnown RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 GAD2Q05329 585 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 AUHQ13825 339 aaKnown RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 RAB6CQ53S08 254 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 PPP6R3Q5H9R7 873 aaPredicted RBP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 SH3PXD2AQ5TCZ1 1133 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 FAXCQ5TGI0 409 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 C1orf228Q6PIY5 440 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 MORC4Q8TE76 937 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 RSAD2Q8WXG1 361 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.19□□□□□ -0.94
UBE3B-208ENST00000538070 ART4Q93070 314 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 CHMP6Q96FZ7 201 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 TWNKQ96RR1 684 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 RAB6CQ9H0N0 254 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 SLC12A6Q9UHW9 1150 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 HEY1Q9Y5J3 304 aa9.19□□□□□ -0.94
UBE3B-208ENST00000538070 ZC3H11AO75152 810 aaKnown RBP eCLIP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms