RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 PCMTD1Q96MG8 357 aaPredicted RBP13.15□□□□□ -0.3
SCARB1-204ENST00000535005 COLEC11Q9BWP8 271 aa13.15□□□□□ -0.3
SCARB1-204ENST00000535005 TTYH3Q9C0H2 523 aa13.15□□□□□ -0.3
SCARB1-204ENST00000535005 L1RE1Q9UN81 338 aa13.15□□□□□ -0.3
SCARB1-204ENST00000535005 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
SCARB1-204ENST00000535005 A0A1W2PQJ5 194 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 KPNA7A9QM74 516 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 H3BQF6 201 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 NRP1O14786 923 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 SPTLC1O15269 473 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 P4HA1P13674 534 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 UCHL3P15374 230 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 OR1G1P47890 313 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 TRIM14Q14142 442 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 SPOPLQ6IQ16 392 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 ENOSF1Q7L5Y1 443 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 LIMS2Q7Z4I7 341 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 C3orf58Q8NDZ4 430 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 PPM1EQ8WY54 764 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 NIF3L1Q9GZT8 377 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 FAM124BQ9H5Z6 455 aaPredicted RBP13.14□□□□□ -0.31
SCARB1-204ENST00000535005 FAM207AQ9NSI2 230 aaPredicted RBP13.14□□□□□ -0.31
SCARB1-204ENST00000535005 CACNG4Q9UBN1 327 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 FAN1Q9Y2M0 1017 aa13.14□□□□□ -0.31
SCARB1-204ENST00000535005 MRPL42Q9Y6G3 142 aaKnown RBP13.14□□□□□ -0.31
SCARB1-204ENST00000535005 EPHB6O15197 1021 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 TLL1O43897 1013 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 B3GAT3O94766 335 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 LAG3P18627 525 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 TBXAS1P24557 533 aaPredicted RBP13.13□□□□□ -0.31
SCARB1-204ENST00000535005 BCAR1P56945 870 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 APBA1Q02410 837 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 WDR72Q3MJ13 1102 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 WDR93Q6P2C0 686 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 TOGARAM2Q6ZUX3 1019 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 DPH6Q7L8W6 267 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 ARHGEF19Q8IW93 802 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 FIBCD1Q8N539 461 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 CLP1Q92989 425 aaKnown RBP13.13□□□□□ -0.31
SCARB1-204ENST00000535005 BCO2Q9BYV7 579 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 PRO3102Q9H379 93 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 ANKZF1Q9H8Y5 726 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 CYP3A43Q9HB55 503 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 UBE2TQ9NPD8 197 aaPredicted RBP13.13□□□□□ -0.31
SCARB1-204ENST00000535005 CEP72Q9P209 647 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 HCSTQ9UBK5 93 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 DNAJC12Q9UKB3 198 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 CTAGE9A4FU28 777 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 CAPN15O75808 1086 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 KIF4AO95239 1232 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 EFEMP2O95967 443 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 CPP00450 1065 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 LINC00271P0C7V0 271 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 TRIM21P19474 475 aaKnown RBP13.13□□□□□ -0.31
SCARB1-204ENST00000535005 IGFBP6P24592 240 aaPredicted RBP13.13□□□□□ -0.31
SCARB1-204ENST00000535005 ASPAP45381 313 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 ALDH7A1P49419 539 aaKnown RBP13.13□□□□□ -0.31
SCARB1-204ENST00000535005 MFAP3P55082 362 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 MLLT1Q03111 559 aaPredicted RBP13.13□□□□□ -0.31
SCARB1-204ENST00000535005 CUL2Q13617 745 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 IQCEQ6IPM2 695 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 KCNT2Q6UVM3 1135 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 PPFIBP1Q86W92 1011 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 CNGA4Q8IV77 575 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 PPM1KQ8N3J5 372 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 KREMEN1Q96MU8 473 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 ZNF558Q96NG5 402 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 STK33Q9BYT3 514 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 MARCH5Q9NX47 278 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 CAPN11Q9UMQ6 739 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 PCDHA11Q9Y5I1 949 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 ADGRG1Q9Y653 693 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 SCN1AP35498 2009 aa13.13□□□□□ -0.31
SCARB1-204ENST00000535005 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.12□□□□□ -0.31
SCARB1-204ENST00000535005 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.12□□□□□ -0.31
SCARB1-204ENST00000535005 M0QZQ0 153 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 GYPCP04921 128 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
SCARB1-204ENST00000535005 TNNC1P63316 161 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 MAP9Q49MG5 647 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 TIGD5Q53EQ6 642 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 ICE2Q659A1 982 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 GJB7Q6PEY0 223 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 RRAGAQ7L523 313 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 TTC39CQ8N584 583 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 TOP6BLQ8N6T0 577 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 UBR7Q8N806 425 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 COLGALT1Q8NBJ5 622 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 ELMO3Q96BJ8 720 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 SUSD3Q96L08 255 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 SENP8Q96LD8 212 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 AAASQ9NRG9 546 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 VPS18Q9P253 973 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 NXF1Q9UBU9 619 aaKnown RBP13.12□□□□□ -0.31
SCARB1-204ENST00000535005 ADAM28Q9UKQ2 775 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 MYO6Q9UM54 1294 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 POLIQ9UNA4 740 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 PRG3Q9Y2Y8 225 aaPredicted RBP13.12□□□□□ -0.31
SCARB1-204ENST00000535005 SNX9Q9Y5X1 595 aa13.12□□□□□ -0.31
SCARB1-204ENST00000535005 ARHGEF37A1IGU5 675 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms