RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 SARS2Q9NP81 518 aaKnown RBP4.19□□□□□ -1.74
CSMD3-210ENST00000534172 C9orf78Q9NZ63 289 aaPredicted RBP4.19□□□□□ -1.74
CSMD3-210ENST00000534172 POGKQ9P215 609 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 ZNF69Q9UC07 566 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 ACTL7AQ9Y615 435 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 KDM5BQ9UGL1 1544 aa4.19□□□□□ -1.74
CSMD3-210ENST00000534172 KAT6BQ8WYB5 2073 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 RNF17Q9BXT8 1623 aaKnown RBP4.18□□□□□ -1.74
CSMD3-210ENST00000534172 A0A088AWK7 358 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 CHEK2O96017 543 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 IL6STP40189 918 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-210ENST00000534172 MAP2K6P52564 334 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 MAPRE1Q15691 268 aaKnown RBP4.18□□□□□ -1.74
CSMD3-210ENST00000534172 HEATR3Q7Z4Q2 680 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 PDSS2Q86YH6 399 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 KLHDC4Q8TBB5 520 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 C20orf173Q96LM9 149 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 MNTQ99583 582 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 C1QTNF3Q9BXJ4 246 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 GPR87Q9BY21 358 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 LDAHQ9H6V9 325 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 GPRC5BQ9NZH0 403 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 JKAMPQ9P055 326 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 LRCH1Q9Y2L9 728 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 NEU2Q9Y3R4 380 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 PLA2R1Q13018 1463 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 KPNA5O15131 536 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 MGEA5O60502 916 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 SLC43A1O75387 559 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 HAUS5O94927 633 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 SRGNP10124 158 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 TNFSF4P23510 183 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 ALDH1A3P47895 512 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 EFEMP1Q12805 493 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 CRHR2Q13324 411 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 SNAPC2Q13487 334 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 ICAM4Q14773 271 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 UBXN2BQ14CS0 331 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 ELF2Q15723 593 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 ZNF280DQ6N043 979 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 LDHAL6AQ6ZMR3 332 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 MAEAQ7L5Y9 396 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 DPP9Q86TI2 863 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 OR10H5Q8NGA6 315 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 CCT6BQ92526 530 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 KIAA1191Q96A73 305 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 LSM14BQ9BX40 385 aaKnown RBP4.18□□□□□ -1.74
CSMD3-210ENST00000534172 INO80BQ9C086 356 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-210ENST00000534172 KLC2Q9H0B6 622 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 VPS11Q9H270 941 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 CHMP4BQ9H444 224 aaKnown RBP4.18□□□□□ -1.74
CSMD3-210ENST00000534172 ZHX3Q9H4I2 956 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 PARPBPQ9NWS1 579 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 CDC23Q9UJX2 597 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 SCINQ9Y6U3 715 aa4.18□□□□□ -1.74
CSMD3-210ENST00000534172 RHPN2P1A8MT19 583 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 ABCB4P21439 1286 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 PCSK1P29120 753 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 CHKAP35790 457 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 CASP5P51878 434 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 NKX6-1P78426 367 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-210ENST00000534172 POLD3Q15054 466 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-210ENST00000534172 PDCD2Q16342 344 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-210ENST00000534172 FAM214AQ32MH5 1076 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 ZNF529Q6P280 563 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 ELOA2Q8IYF1 753 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-210ENST00000534172 ZNF808Q8N4W9 903 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-210ENST00000534172 ZGPATQ8N5A5 531 aaKnown RBP4.17□□□□□ -1.74
CSMD3-210ENST00000534172 NUP133Q8WUM0 1156 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 STON2Q8WXE9 905 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 SUCLG2Q96I99 432 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 DMRTA2Q96SC8 542 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 ADOQ96SZ5 270 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 SAGE1Q9NXZ1 904 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 CORO2BQ9UQ03 480 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 TSC22D4Q9Y3Q8 395 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 NR2E3Q9Y5X4 410 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 H3BUI4 141 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 FOXN3O00409 490 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-210ENST00000534172 FRS3O43559 492 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 THP07101 528 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 MYF5P13349 255 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 PPM1AP35813 382 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 FLYWCH1Q4VC44 716 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 DGKKQ5KSL6 1271 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 APOA5Q6Q788 366 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 TMPRSS6Q8IU80 811 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 PLBD2Q8NHP8 589 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 PHKBQ93100 1093 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 NT5C1BQ96P26 610 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 MED15Q96RN5 788 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 KRTAP17-1Q9BYP8 105 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 C22orf23Q9BZE7 217 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 ZNF703Q9H7S9 590 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-210ENST00000534172 BRD9Q9H8M2 597 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 CERS4Q9HA82 394 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 ATP11BQ9Y2G3 1177 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 PCDHA3Q9Y5H8 950 aa4.17□□□□□ -1.74
CSMD3-210ENST00000534172 ZNF142P52746 1687 aaPredicted RBP4.16□□□□□ -1.74
CSMD3-210ENST00000534172 XDHP47989 1333 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms