RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 GJA1P17302 382 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 CD72P21854 359 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 FCARP24071 287 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 AMPD3Q01432 767 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 TEAD2Q15562 447 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 SV2CQ496J9 727 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 SLC39A12Q504Y0 691 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 TPRG1Q6ZUI0 275 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 DNAJB7Q7Z6W7 309 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 MFSD6LQ8IWD5 586 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 KCNG4Q8TDN1 519 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 C2orf15Q8WU43 125 aaKnown RBP13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 DEPDC1BQ8WUY9 529 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 PSMG2Q969U7 264 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 TNMDQ9H2S6 317 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 IKZF4Q9H2S9 585 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 CRISPLD1Q9H336 500 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 LTB4R2Q9NPC1 389 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 TRPV5Q9NQA5 729 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 HEBP1Q9NRV9 189 aa13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 SPATA6Q9NWH7 488 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 MTF2Q9Y483 593 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-213ENST00000533562 A0A087X0B3 334 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 A0A1W2PRU2 124 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 ZNF263O14978 683 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 KIAA0391O15091 583 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 LAMTOR5O43504 91 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 EXTL3O43909 919 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 LRRN2O75325 713 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 LMNAP02545 664 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 HSP90AA1P07900 732 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 SP9P0CG40 484 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 GDI1P31150 447 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 VIPR2P41587 438 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 TFAMQ00059 246 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 GRM2Q14416 872 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 VEPH1Q14D04 833 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 TAF12Q16514 161 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 MGAT5BQ3V5L5 792 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 YAF2Q8IY57 180 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 EFCAB13Q8IY85 973 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 DCP1BQ8IZD4 617 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 OR10T2Q8NGX3 314 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 SHKBP1Q8TBC3 707 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 FAM200AQ8TCP9 573 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 SNX21Q969T3 373 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 SAAL1Q96ER3 474 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 BORCS6Q96GS4 357 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 ZNF560Q96MR9 790 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 TMEM209Q96SK2 561 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 SEPT5Q99719 369 aaPredicted RBP13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 LRRC3Q9BY71 257 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 ZCWPW1Q9H0M4 648 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 DNAJC25Q9H1X3 360 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 CUEDC2Q9H467 287 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 ZNF334Q9HCZ1 680 aaPredicted RBP13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 RBAKQ9NYW8 714 aaPredicted RBP13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 TFIP11Q9UBB9 837 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 SCN1AP35498 2009 aa13.39□□□□□ -0.27
CAPRIN1-213ENST00000533562 HEPACAM2A8MVW5 462 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 NRG2O14511 850 aaPredicted RBP13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 PRPF6O94906 941 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 PRKCSHP14314 528 aaPredicted RBP13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 RPS9P46781 194 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 CASP5P51878 434 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 ARHGAP15Q53QZ3 475 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 WSCD1Q658N2 575 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 VITQ6UXI7 678 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 TMC8Q8IU68 726 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 BRSK2Q8IWQ3 736 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 ADSSL1Q8N142 457 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 CSGALNACT2Q8N6G5 542 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 IQUBQ8NA54 791 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 SPPL2BQ8TCT7 592 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 CLDN23Q96B33 292 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 ATXN3LQ9H3M9 355 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 KBTBD4Q9NVX7 518 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 FBXO4Q9UKT5 387 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 AGAP1Q9UPQ3 857 aa13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 R3HCC1Q9Y3T6 440 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-213ENST00000533562 DPYSL4O14531 572 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 CUTAO60888 179 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 HUS1O60921 280 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 YEATS4O95619 227 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 ITGB3P05106 788 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 TARSP26639 723 aaKnown RBP13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 GABRR2P28476 465 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 POLR2BP30876 1174 aaKnown RBP13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 MLLT6P55198 1093 aaPredicted RBP13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 RBP5P82980 135 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 TSPY1Q01534 308 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 ZNF528Q3MIS6 628 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 GAREM2Q75VX8 874 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 ARID3BQ8IVW6 561 aaPredicted RBP13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 HSCBQ8IWL3 235 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 TMEM86AQ8N2M4 240 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 GPD1LQ8N335 351 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 TTC9BQ8N6N2 239 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 LRRC52Q8N7C0 313 aa13.37□□□□□ -0.27
CAPRIN1-213ENST00000533562 CSGALNACT1Q8TDX6 532 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms