RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 OR10T2Q8NGX3 314 aa19.25■□□□□ 0.67
PCF11-206ENST00000533018 ATXN3LQ9H3M9 355 aa19.25■□□□□ 0.67
PCF11-206ENST00000533018 ASB3Q9Y575 518 aa19.25■□□□□ 0.67
PCF11-206ENST00000533018 PCDHB13Q9Y5F0 798 aa19.25■□□□□ 0.67
PCF11-206ENST00000533018 TSC2P49815 1807 aa19.25■□□□□ 0.67
PCF11-206ENST00000533018 DPYSL4O14531 572 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 IL18RAPO95256 599 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 CYP11A1P05108 521 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 ADSSP30520 456 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 TUFMP49411 452 aaKnown RBP19.24■□□□□ 0.67
PCF11-206ENST00000533018 TFAMQ00059 246 aaKnown RBP19.24■□□□□ 0.67
PCF11-206ENST00000533018 VEPH1Q14D04 833 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 TAF12Q16514 161 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 STXBP5Q5T5C0 1151 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 L1TD1Q5T7N2 865 aaKnown RBP19.24■□□□□ 0.67
PCF11-206ENST00000533018 CRELD2Q6UXH1 353 aaPredicted RBP19.24■□□□□ 0.67
PCF11-206ENST00000533018 TMC8Q8IU68 726 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 PDILTQ8N807 584 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 CSGALNACT1Q8TDX6 532 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 ATRIPQ8WXE1 791 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 FAM3CQ92520 227 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 PSMG2Q969U7 264 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 E2F7Q96AV8 911 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 CLDN23Q96B33 292 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 DNAJC19Q96DA6 116 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 SAAL1Q96ER3 474 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 USP28Q96RU2 1077 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 LRRC3Q9BY71 257 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 TRPV4Q9HBA0 871 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 FBXO4Q9UKT5 387 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 PIAS3Q9Y6X2 628 aa19.24■□□□□ 0.67
PCF11-206ENST00000533018 KPNA7A9QM74 516 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 FGF19O95750 216 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 GABRR2P28476 465 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 RPS9P46781 194 aaKnown RBP19.23■□□□□ 0.67
PCF11-206ENST00000533018 SLC39A14Q15043 492 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 ZNF528Q3MIS6 628 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 SV2CQ496J9 727 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 ARHGAP15Q53QZ3 475 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 WSCD1Q658N2 575 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 EFCAB13Q8IY85 973 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 INTS4Q96HW7 963 aaKnown RBP19.23■□□□□ 0.67
PCF11-206ENST00000533018 LPIN3Q9BQK8 851 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 ZCWPW1Q9H0M4 648 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 ZSCAN16Q9H4T2 348 aaPredicted RBP19.23■□□□□ 0.67
PCF11-206ENST00000533018 PANK4Q9NVE7 773 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 MTMR6Q9Y217 621 aa19.23■□□□□ 0.67
PCF11-206ENST00000533018 DMXL1Q9Y485 3027 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 STX6O43752 255 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 PPP1R37O75864 691 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 CASP5P51878 434 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 KPNA1P52294 538 aaPredicted RBP19.22■□□□□ 0.67
PCF11-206ENST00000533018 POU5F1Q01860 360 aaKnown RBP19.22■□□□□ 0.67
PCF11-206ENST00000533018 STK38Q15208 465 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 GPR158Q5T848 1215 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 TSSK4Q6SA08 328 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 GAREM2Q75VX8 874 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 ARID3BQ8IVW6 561 aaPredicted RBP19.22■□□□□ 0.67
PCF11-206ENST00000533018 KIAA2013Q8IYS2 634 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 CACTINQ8WUQ7 758 aaKnown RBP19.22■□□□□ 0.67
PCF11-206ENST00000533018 ZNF560Q96MR9 790 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 GCNAQ96QF7 691 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 STRA6Q9BX79 667 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 PCIF1Q9H4Z3 704 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 TRPV5Q9NQA5 729 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 ABI2Q9NYB9 513 aaPredicted RBP19.22■□□□□ 0.67
PCF11-206ENST00000533018 RBAKQ9NYW8 714 aaPredicted RBP19.22■□□□□ 0.67
PCF11-206ENST00000533018 HSFX1Q9UBD0 423 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 DCHS1Q96JQ0 3298 aa19.22■□□□□ 0.67
PCF11-206ENST00000533018 GOLGA8IPA6NC78 632 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 GOLGA8JA6NMD2 632 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 LDHAP00338 332 aaKnown RBP19.21■□□□□ 0.67
PCF11-206ENST00000533018 CCNE1P24864 410 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 PNPLA4P41247 253 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 ID4P47928 161 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 MTAPQ13126 283 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 NT5DC4Q86YG4 428 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 DCP1BQ8IZD4 617 aaKnown RBP19.21■□□□□ 0.67
PCF11-206ENST00000533018 ZSWIM2Q8NEG5 633 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 GIPC2Q8TF65 315 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 LMAN1LQ9HAT1 526 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 OLFML3Q9NRN5 406 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 AGAP1Q9UPQ3 857 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 NCANO14594 1321 aa19.21■□□□□ 0.67
PCF11-206ENST00000533018 ZNF638Q14966 1978 aaKnown RBP19.21■□□□□ 0.67
PCF11-206ENST00000533018 A0A087X0B3 334 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 SHISA7A6NL88 538 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 K7ELQ4 463 aaPredicted RBP19.2■□□□□ 0.66
PCF11-206ENST00000533018 ITGB3P05106 788 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 KRT19P08727 400 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 GARTP22102 1010 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 POLR2BP30876 1174 aaKnown RBP19.2■□□□□ 0.66
PCF11-206ENST00000533018 CYP4F8P98187 520 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 SMARCB1Q12824 385 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 FZD5Q13467 585 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 ALCAMQ13740 583 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 LRRTM3Q86VH5 581 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 CCDC65Q8IXS2 484 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 TTC8Q8TAM2 541 aa19.2■□□□□ 0.66
PCF11-206ENST00000533018 SPPL2BQ8TCT7 592 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms