RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 CERS4Q9HA82 394 aa5.57□□□□□ -1.52
CD44-220ENST00000525688 GPRC5BQ9NZH0 403 aa5.57□□□□□ -1.52
CD44-220ENST00000525688 NOL7Q9UMY1 257 aaKnown RBP5.57□□□□□ -1.52
CD44-220ENST00000525688 CLCA2Q9UQC9 943 aa5.57□□□□□ -1.52
CD44-220ENST00000525688 LRCH1Q9Y2L9 728 aa5.57□□□□□ -1.52
CD44-220ENST00000525688 CLSPNQ9HAW4 1339 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 A0A1W2PPC4 97 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 DYTNA2CJ06 578 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 F5H423 210 aaPredicted RBP5.56□□□□□ -1.52
CD44-220ENST00000525688 TBC1D4O60343 1298 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 SRGNP10124 158 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 TYRP1P17643 537 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 PPM1AP35813 382 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 IL6STP40189 918 aaPredicted RBP5.56□□□□□ -1.52
CD44-220ENST00000525688 KCNJ5P48544 419 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 NOMO3P69849 1222 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 PKN1Q16512 942 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 CSRP2Q16527 193 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 CCDC96Q2M329 555 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 FAM214AQ32MH5 1076 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 FKBP15Q5T1M5 1219 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 NT5DC1Q5TFE4 455 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 SLFN13Q68D06 897 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 HIBCHQ6NVY1 386 aaPredicted RBP5.56□□□□□ -1.52
CD44-220ENST00000525688 UBE3BQ7Z3V4 1068 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 MICU3Q86XE3 530 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 AOPEPQ8N6M6 819 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 ATP11CQ8NB49 1132 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 ZFP28Q8NHY6 868 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 ZSCAN18Q8TBC5 510 aaPredicted RBP5.56□□□□□ -1.52
CD44-220ENST00000525688 POF1BQ8WVV4 589 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 SCAMP4Q969E2 229 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 KIAA1191Q96A73 305 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 FMNL2Q96PY5 1086 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 MEGF9Q9H1U4 602 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 EPC1Q9H2F5 836 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 SERHLQ9NQF3 203 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 SACM1LQ9NTJ5 587 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 FBXO34Q9NWN3 711 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 LUZP4Q9P127 313 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 HECAQ9UBI9 543 aaPredicted RBP5.56□□□□□ -1.52
CD44-220ENST00000525688 POLG2Q9UHN1 485 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 ASAP1Q9ULH1 1129 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.56□□□□□ -1.52
CD44-220ENST00000525688 CLIP1P30622 1438 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 MAP3K4Q9Y6R4 1608 aa5.56□□□□□ -1.52
CD44-220ENST00000525688 APOL1O14791 398 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 PAX4O43316 350 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 DHX16O60231 1041 aaKnown RBP5.55□□□□□ -1.52
CD44-220ENST00000525688 DNAJB5O75953 348 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 GNAI2P04899 355 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 ABCB4P21439 1286 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 TCF15Q12870 199 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 SLC13A2Q13183 592 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 SLC44A4Q53GD3 710 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 C3orf38Q5JPI3 329 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 XYLT1Q86Y38 959 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 SP8Q8IXZ3 490 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 CPXCR1Q8N123 301 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 TTC30BQ8N4P2 665 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 GIMAP8Q8ND71 665 aaPredicted RBP5.55□□□□□ -1.52
CD44-220ENST00000525688 TFAP2CQ92754 450 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 ERP27Q96DN0 273 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 MPHOSPH9Q99550 1183 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 HERPUD2Q9BSE4 406 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 CRB3Q9BUF7 120 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 PLA2G12BQ9BX93 195 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 GSTO2Q9H4Y5 243 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 SLAMF7Q9NQ25 335 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 CLIC5Q9NZA1 410 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 MYO1AQ9UBC5 1043 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 SRRDQ9UH36 339 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 GTF2A1LQ9UNN4 478 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 PLEKHM1Q9Y4G2 1056 aa5.55□□□□□ -1.52
CD44-220ENST00000525688 PPRC1Q5VV67 1664 aaKnown RBP5.54□□□□□ -1.52
CD44-220ENST00000525688 A0A087WWL8 130 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 PRR5-ARHGAP8B1AHC4 643 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 CHEK2O96017 543 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 GNAT2P19087 354 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 PHKA1P46020 1223 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 TERF1P54274 439 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 RPS16P62249 146 aaKnown RBP5.54□□□□□ -1.52
CD44-220ENST00000525688 POU6F2P78424 691 aaPredicted RBP5.54□□□□□ -1.52
CD44-220ENST00000525688 MXRA7P84157 204 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 TNFAIP2Q03169 654 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 CTBP1Q13363 440 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 RAB32Q13637 225 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 GRM7Q14831 915 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 ATXN7L2Q5T6C5 722 aaPredicted RBP5.54□□□□□ -1.52
CD44-220ENST00000525688 UTP14CQ5TAP6 766 aaKnown RBP5.54□□□□□ -1.52
CD44-220ENST00000525688 LMBRD2Q68DH5 695 aaPredicted RBP5.54□□□□□ -1.52
CD44-220ENST00000525688 KRT77Q7Z794 578 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 TAX1BP1Q86VP1 789 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 SUGP1Q8IWZ8 645 aaKnown RBP5.54□□□□□ -1.52
CD44-220ENST00000525688 CCDC33Q8N5R6 958 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 FITM2Q8N6M3 262 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 ANKRD42Q8N9B4 389 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 MDGA1Q8NFP4 955 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 OR52N2Q8NGI0 321 aa5.54□□□□□ -1.52
CD44-220ENST00000525688 TMEM41AQ96HV5 264 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms